RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 DGUOKQ16854 277 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 ZNF181Q2M3W8 571 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 TYSND1Q2T9J0 566 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 ADPRMQ3LIE5 342 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 SPDYE2Q495Y8 402 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 COLEC12Q5KU26 742 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 ANGEL2Q5VTE6 544 aaKnown RBP11.88□□□□□ -0.51
SHMT2-201ENST00000328923 DPY19L3Q6ZPD9 716 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 SLC26A11Q86WA9 606 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 NIM1KQ8IY84 436 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 ADGRF2Q8IZF7 708 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 OR7A2PQ8NGA2 310 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 SPATA18Q8TC71 538 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 FANK1Q8TC84 345 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 FAM151AQ8WW52 585 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 MARVELD3Q96A59 401 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 RIPOR3Q96MK2 946 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 NPAS2Q99743 824 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 C11orf70Q9BRQ4 267 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 TRAF4Q9BUZ4 470 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-201ENST00000328923 BBS2Q9BXC9 721 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 TEKT3Q9BXF9 490 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 FAM96AQ9H5X1 160 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 DHX33Q9H6R0 707 aaKnown RBP11.88□□□□□ -0.51
SHMT2-201ENST00000328923 USTQ9Y2C2 406 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 IPPQ9Y573 584 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 CNTNAP1P78357 1384 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 TRAV6A0A075B6T7 132 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 KRT37O76014 449 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 POU3F3P20264 500 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-201ENST00000328923 DSG3P32926 999 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 PIGFQ07326 219 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 MFSD13AQ14CX5 517 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 HABP4Q5JVS0 413 aaKnown RBP11.87□□□□□ -0.51
SHMT2-201ENST00000328923 KIAA1324Q6UXG2 1013 aaKnown RBP11.87□□□□□ -0.51
SHMT2-201ENST00000328923 LINC00299Q6ZSB3 139 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 CDH24Q86UP0 819 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 SFRP1Q8N474 314 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 AGBL3Q8NEM8 1001 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 SLC2A14Q8TDB8 520 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 PROX1Q92786 737 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 UCK2Q9BZX2 261 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.87□□□□□ -0.516e-9■□□□□ 10.6
SHMT2-201ENST00000328923 SYBUQ9NX95 663 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 FAM8A1Q9UBU6 413 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 MRPS7Q9Y2R9 242 aaKnown RBP11.87□□□□□ -0.51
SHMT2-201ENST00000328923 RAD54BQ9Y620 910 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 PABPN1LA6NDY0 278 aaKnown RBP11.87□□□□□ -0.51
SHMT2-201ENST00000328923 H0YC42 278 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 GPR25O00155 361 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 ITGALP20701 1170 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 CD9P21926 228 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 GLDCP23378 1020 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 HOXA13P31271 388 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-201ENST00000328923 HNF1BP35680 557 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 CAPGP40121 348 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 ARCN1P48444 511 aaKnown RBP11.87□□□□□ -0.51
SHMT2-201ENST00000328923 TPD52P55327 224 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-201ENST00000328923 TFAMQ00059 246 aaKnown RBP11.87□□□□□ -0.51
SHMT2-201ENST00000328923 ZNF704Q6ZNC4 412 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-201ENST00000328923 SV2AQ7L0J3 742 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 ABRAQ8N0Z2 381 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 PIK3C3Q8NEB9 887 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 VANGL1Q8TAA9 524 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-201ENST00000328923 AGR3Q8TD06 166 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 TESCQ96BS2 214 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 FYTTD1Q96QD9 318 aaKnown RBP11.87□□□□□ -0.51
SHMT2-201ENST00000328923 RIT2Q99578 217 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 TEX13BQ9BXU2 312 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 PRRG3Q9BZD7 231 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 ROGDIQ9GZN7 287 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 FBXL12Q9NXK8 326 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 GABBR1Q9UBS5 961 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 CYB5R1Q9UHQ9 305 aa11.87□□□□□ -0.51
SHMT2-201ENST00000328923 TCRBV3S1A0A5B6 114 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 TMEM191CA6NGB0 347 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 LRRC72A6NJI9 287 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 OLFM2O95897 454 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 CYP2A6P11509 494 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-201ENST00000328923 ADORA2AP29274 412 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 SERPINB10P48595 397 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 NLRP11P59045 1033 aaKnown RBP11.86□□□□□ -0.51
SHMT2-201ENST00000328923 VBP1P61758 197 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 CYBRD1Q53TN4 286 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 LGSNQ5TDP6 509 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 CATSPER4Q7RTX7 472 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 DHRSXQ8N5I4 330 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 PCDH20Q8N6Y1 951 aaKnown RBP11.86□□□□□ -0.51
SHMT2-201ENST00000328923 MTMR14Q8NCE2 650 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 PPP1R13LQ8WUF5 828 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 POMGNT1Q8WZA1 660 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 NXNL1Q96CM4 212 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 MSANTD3Q96H12 275 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 SEC22CQ9BRL7 303 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 ZNF577Q9BSK1 485 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 TBC1D22BQ9NU19 505 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 KLF15Q9UIH9 416 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 ZNF175Q9Y473 711 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 LTBP3Q9NS15 1303 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms