RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 CDK15Q96Q40 435 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 KATNBL1Q9H079 304 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 TRAF6Q9Y4K3 522 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 FGF1P05230 155 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 ABRQ12979 859 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 TRMT5Q32P41 509 aaKnown RBP16.05■□□□□ 0.16
SYNM-201ENST00000328642 ATP6AP1LQ52LC2 224 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 SYTL1Q8IYJ3 562 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 ACVR1CQ8NER5 493 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 SLC22A17Q8WUG5 538 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 ELOVL6Q9H5J4 265 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 CXorf56Q9H5V9 222 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 RIC8BQ9NVN3 520 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.04■□□□□ 0.16
SYNM-201ENST00000328642 ZNF197O14709 1029 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 ZNF623O75123 536 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 LRATO95237 230 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 SERPINA6P08185 405 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 ECT2LQ008S8 904 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 PRKD1Q15139 912 aaPredicted RBP16.04■□□□□ 0.16
SYNM-201ENST00000328642 ZNF284Q2VY69 593 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 PAQR3Q6TCH7 311 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 SLC22A9Q8IVM8 553 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 MIPOL1Q8TD10 442 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 INPP5DQ92835 1189 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 ADNPQ9H2P0 1102 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 YIPF1Q9Y548 306 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 TLL2Q9Y6L7 1015 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 TRAV19A0A0A6YYK7 116 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 ARHGAP10A1A4S6 786 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 IL1BP01584 269 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 CCL5P13501 91 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 CES1P23141 567 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 IDH3AP50213 366 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 PTPRRQ15256 657 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 PLEKHG4Q58EX7 1191 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 ZNF789Q5FWF6 425 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 PIWIL4Q7Z3Z4 852 aaKnown RBP16.04■□□□□ 0.16
SYNM-201ENST00000328642 TRAPPC5Q8IUR0 188 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 SIDT2Q8NBJ9 832 aaKnown RBP16.04■□□□□ 0.16
SYNM-201ENST00000328642 FCRL5Q96RD9 977 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 SMOC2Q9H3U7 446 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 SYCE1LA8MT33 242 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 BIRC5O15392 142 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 PCNAP12004 261 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 HLA-DPA1P20036 260 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 CD68P34810 354 aaPredicted RBP16.04■□□□□ 0.16
SYNM-201ENST00000328642 HNF4AP41235 474 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 GSSP48637 474 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 LACTB2Q53H82 288 aaPredicted RBP16.04■□□□□ 0.16
SYNM-201ENST00000328642 C11orf74Q86VG3 221 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 ZC3HC1Q86WB0 502 aaKnown RBP16.04■□□□□ 0.16
SYNM-201ENST00000328642 TMEM173Q86WV6 379 aaPredicted RBP16.04■□□□□ 0.16
SYNM-201ENST00000328642 GDPD5Q8WTR4 605 aa16.04■□□□□ 0.16
SYNM-201ENST00000328642 MTIF3Q9H2K0 278 aaKnown RBP16.04■□□□□ 0.16
SYNM-201ENST00000328642 hCG_2014768A0A024R1R8 64 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 OR2AG2A6NM03 316 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 FYNP06241 537 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 PRKCHP24723 683 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 GCAP28676 217 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 CRY1Q16526 586 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 MYLIPQ8WY64 445 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 APBB2Q92870 758 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 FUBP3Q96I24 572 aaKnown RBP eCLIP16.03■□□□□ 0.16
SYNM-201ENST00000328642 FOPNLQ96NB1 174 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 SLC2A13Q96QE2 648 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 CDK5RAP1Q96SZ6 601 aaKnown RBP16.03■□□□□ 0.16
SYNM-201ENST00000328642 SLC39A3Q9BRY0 314 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 VPS45Q9NRW7 570 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 ABCB8Q9NUT2 735 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 TDRKHQ9Y2W6 561 aaKnown RBP16.03■□□□□ 0.16
SYNM-201ENST00000328642 K7ERQ8 282 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 HAS3O00219 553 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 GABRDO14764 452 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 INSIG1O15503 277 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 EFNA1P20827 205 aaPredicted RBP16.03■□□□□ 0.16
SYNM-201ENST00000328642 CSKP41240 450 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 TIGD2Q4W5G0 525 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 UGT3A1Q6NUS8 523 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 TREML1Q86YW5 311 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 FAM126BQ8IXS8 530 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 TSPAN18Q96SJ8 248 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 ATG10Q9H0Y0 220 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 CROTQ9UKG9 612 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 VPS9D1Q9Y2B5 631 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 ANKRD6Q9Y2G4 727 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 A0A1B0GVM2 712 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 TCAF2A6NFQ2 919 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 ZNF839A8K0R7 811 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 ZNF23P17027 643 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 ME2P23368 584 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 VEGFBP49765 207 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 ARSDP51689 593 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 GPR17Q13304 367 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 TBCCQ15814 346 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 OSBPL2Q9H1P3 480 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 NDUFAF1Q9Y375 327 aa16.03■□□□□ 0.16
SYNM-201ENST00000328642 E7ESA3 106 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 GPR39O43194 453 aa16.02■□□□□ 0.16
SYNM-201ENST00000328642 IPO13O94829 963 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms