RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 PCDHB9Q9Y5E1 797 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 DOCK6Q96HP0 2047 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 A0A087WUV0 522 aaPredicted RBP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 PABPN1LA6NDY0 278 aaKnown RBP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 OR5K4A6NMS3 321 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 ZNF839A8K0R7 811 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 BHMG1C9JSJ3 638 aaPredicted RBP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 MID1O15344 667 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 RAD51CO43502 376 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 ADAM23O75077 832 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 PCDH8O95206 1070 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 FTH1P02794 183 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 ALPIP09923 528 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 ZNF7P17097 686 aaPredicted RBP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 RPS3P23396 243 aaKnown RBP eCLIP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 CTSOP43234 321 aaPredicted RBP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 ADPRHP54922 357 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 CSTF1Q05048 431 aaKnown RBP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 C2orf54Q08AI8 447 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 NIPAL4Q0D2K0 466 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 LRRC14Q15048 493 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 ACOX1Q15067 660 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 LONRF1Q17RB8 773 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 FASTKD1Q53R41 847 aaKnown RBP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 SIRPB2Q5JXA9 342 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 PIP5KL1Q5T9C9 394 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 PEAR1Q5VY43 1037 aaPredicted RBP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 SNX20Q7Z614 316 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 CPNE8Q86YQ8 564 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 OR14C36Q8NHC7 312 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 WDR48Q8TAF3 677 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 GSDMBQ8TAX9 411 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 PYROXD1Q8WU10 500 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 ATG4AQ8WYN0 398 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 MTBPQ96DY7 904 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 RPL10LQ96L21 214 aaKnown RBP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 TSNARE1Q96NA8 513 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 RBM15Q96T37 977 aaKnown RBP eCLIP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 DPYSL5Q9BPU6 564 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 FUT8Q9BYC5 575 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 FOXQ1Q9C009 403 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 TNKS2Q9H2K2 1166 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 PCDH12Q9NPG4 1184 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 CLEC4EQ9ULY5 219 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 HEBP2Q9Y5Z4 205 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 A0A0U1RQJ8 604 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 C1orf232A0A0U1RR37 186 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 OTOL1A6NHN0 477 aaPredicted RBP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 TTI1O43156 1089 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 LATO43561 262 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 FKBP9O95302 570 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 MYZAPP0CAP1 466 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 CD68P34810 354 aaPredicted RBP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 MAGEA3P43357 314 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 TPMTP51580 245 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 ITGA8P53708 1063 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 MGAT5Q09328 741 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 CNTN1Q12860 1018 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 MTAPQ13126 283 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 RPA4Q13156 261 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 ATXN7L2Q5T6C5 722 aaPredicted RBP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 AGBL4Q5VU57 503 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 LVRNQ6Q4G3 990 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 PACS1Q6VY07 963 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 RBFAQ8N0V3 343 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 RAB42Q8N4Z0 105 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 ZBTB44Q8NCP5 570 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 GRIN3AQ8TCU5 1115 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 DNASE2BQ8WZ79 361 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 CPT1BQ92523 772 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 ZNF419Q96HQ0 510 aaPredicted RBP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 COQ10AQ96MF6 247 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 EBNA1BP2Q99848 306 aaKnown RBP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 CCM2Q9BSQ5 444 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 ROPN1BQ9BZX4 212 aaPredicted RBP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 EPB41L1Q9H4G0 881 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 ROPN1Q9HAT0 212 aaPredicted RBP5.17□□□□□ -1.58
LRIT3-201ENST00000327908 POPDC3Q9HBV1 291 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 B4GALT6Q9UBX8 382 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 CSNK1G3Q9Y6M4 447 aa5.17□□□□□ -1.58
LRIT3-201ENST00000327908 TBC1D3DA0A087WVF3 549 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 TBC1D3IA0A087WXS9 549 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 TBC1D3EA0A087X179 549 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 TBC1D3KA0A087X1G2 549 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 IGHV1OR15-9A0A0B4J2B8 117 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 CCDC151A5D8V7 595 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 TBC1D3FA6NER0 549 aaPredicted RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 TBC1D3LB9A6J9 549 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 K7ESF4 209 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 ZNF185O15231 689 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 SMAD6O43541 496 aaKnown RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 RASGRP1O95267 797 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 TBC1D3HP0C7X1 549 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 TDGF1P13385 188 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 NDUFS1P28331 727 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 SPINT3P49223 89 aa5.16□□□□□ -1.58
LRIT3-201ENST00000327908 DUSP3P51452 185 aaPredicted RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 ADARP55265 1226 aaKnown RBP5.16□□□□□ -1.58
LRIT3-201ENST00000327908 FAM193AP78312 1265 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms