RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 UXS1Q8NBZ7 420 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 HDAC10Q969S8 669 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 DPY30Q9C005 99 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 SLA2Q9H6Q3 261 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 WDCPQ9H6R7 721 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 SEC14L4Q9UDX3 406 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 TNPO3Q9Y5L0 923 aaKnown RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 USP12O75317 370 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 CYP1A1P04798 512 aaPredicted RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 PAICSP22234 425 aaKnown RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 MIPP30301 263 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 PLK1P53350 603 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 CDH18Q13634 790 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 TLR1Q15399 786 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 CARTPTQ16568 116 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 GCNT7Q6ZNI0 430 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 C3orf67Q6ZVT6 689 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 SV2AQ7L0J3 742 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 CYP3A43Q9HB55 503 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 MED11Q9P086 117 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 TMEM131Q92545 1883 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 TANC1Q9C0D5 1861 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 SLIT2O94813 1529 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 MAGEB3O15480 346 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 TUBP50607 506 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 ZNF135P52742 658 aaPredicted RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 ZNF143P52747 638 aaPredicted RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 RAB39AQ14964 217 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 PRKD1Q15139 912 aaPredicted RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 ASTE1Q2TB18 679 aaPredicted RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 GK5Q6ZS86 529 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 CATSPER4Q7RTX7 472 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 PHF13Q86YI8 300 aaPredicted RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 SULF1Q8IWU6 871 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 RAVER2Q9HCJ3 691 aaKnown RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 MARF1Q9Y4F3 1742 aaKnown RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 WNK2Q9Y3S1 2297 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 PIK3CGP48736 1102 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 RFTN1Q14699 578 aaPredicted RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 TGFBIQ15582 683 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 SHROOM1Q2M3G4 852 aaPredicted RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 SV2CQ496J9 727 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 SFT2D3Q587I9 215 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 PTF1AQ7RTS3 328 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 LILRB4Q8NHJ6 448 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 IPCEF1Q8WWN9 437 aaPredicted RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 LPAR1Q92633 364 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 TRNT1Q96Q11 434 aaKnown RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 VAT1Q99536 393 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 UBQLN1Q9UMX0 589 aaKnown RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 PLXNA2O75051 1894 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 ABCB7O75027 752 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 PTTG1O95997 202 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 NR3C2P08235 984 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 TPSB2P20231 275 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 FAUP35544 74 aaKnown RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 CDC42EP1Q00587 391 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 CD83Q01151 205 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 FMO1Q01740 532 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 RPL6Q02878 288 aaKnown RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 TPSAB1Q15661 275 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 DOK7Q18PE1 504 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 TAF8Q7Z7C8 310 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 HDAC2Q92769 488 aaKnown RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 SH2D3AQ9BRG2 576 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 TAS2R13Q9NYV9 303 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 ZMAT5Q9UDW3 170 aaKnown RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 MEGF6O75095 1541 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 PRAMEF33A0A0G2JMD5 474 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 BCLAF3A2AJT9 711 aaKnown RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 PRAMEF10O60809 474 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 CYP19A1P11511 503 aaPredicted RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 IL7P13232 177 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 MAB21L1Q13394 359 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 MAPKAPK3Q16644 382 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 ZRANB3Q5FWF4 1079 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 DNAJC14Q6Y2X3 702 aaPredicted RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 BBS12Q6ZW61 710 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 CXXC5Q7LFL8 322 aaKnown RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 TREML1Q86YW5 311 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 MPP5Q8N3R9 675 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 DNAJC19Q96DA6 116 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 C8orf48Q96LL4 319 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 GLT1D1Q96MS3 346 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 ZBTB26Q9HCK0 441 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 PNPOQ9NVS9 261 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 TRPM3Q9HCF6 1732 aaPredicted RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 EML1O00423 815 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 RXFP2Q8WXD0 754 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 ASIC4Q96FT7 647 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 SLC38A2Q96QD8 506 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 CAMKK2Q96RR4 588 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 CATSPERZQ9NTU4 200 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 SPASTQ9UBP0 616 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 H3BNH8 94 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 PLOD2O00469 737 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 ACO1P21399 889 aaKnown RBP7.06□□□□□ -1.28
SMC1A-201ENST00000322213 LRP8Q14114 963 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 GADL1Q6ZQY3 521 aa7.06□□□□□ -1.28
SMC1A-201ENST00000322213 SPPL2CQ8IUH8 684 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms