RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 RMND5AQ9H871 391 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 SF3B1O75533 1304 aaKnown RBP eCLIP16.5■□□□□ 0.23
CLIP4-201ENST00000320081 EDN1P05305 212 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 HIST2H2ACQ16777 129 aaPredicted RBP16.5■□□□□ 0.23
CLIP4-201ENST00000320081 INTS6LQ5JSJ4 861 aaKnown RBP16.5■□□□□ 0.23
CLIP4-201ENST00000320081 LDLRAP1Q5SW96 308 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 HIST2H2AA3Q6FI13 130 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 GPRIN3Q6ZVF9 776 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 DBF4BQ8NFT6 615 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 MCOLN3Q8TDD5 553 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 PAAF1Q9BRP4 392 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 CD84Q9UIB8 345 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 H3BN98 237 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 SLC44A4Q53GD3 710 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 RBM20Q5T481 1227 aaKnown RBP16.5■□□□□ 0.23
CLIP4-201ENST00000320081 FRMD7Q6ZUT3 714 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 TREML1Q86YW5 311 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 CPNE9Q8IYJ1 553 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 SLC35F5Q8WV83 523 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 FAM126AQ9BYI3 521 aaPredicted RBP16.5■□□□□ 0.23
CLIP4-201ENST00000320081 J3KR12 359 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 BCL10O95999 233 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 TSHRP16473 764 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 HSPA7P48741 367 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 ZNF252P-AS1Q0IIN9 211 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 NAB1Q13506 487 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 ATXN7L2Q5T6C5 722 aaPredicted RBP16.5■□□□□ 0.23
CLIP4-201ENST00000320081 FAM45BPQ6NSW5 357 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 FAM45AQ8TCE6 357 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 C12orf42Q96LP6 360 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 C2orf49Q9BVC5 232 aaPredicted RBP16.5■□□□□ 0.23
CLIP4-201ENST00000320081 SORCS3Q9UPU3 1222 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 GIT1Q9Y2X7 761 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 STBD1O95210 358 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 VAV1P15498 845 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 SPIDRQ14159 915 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 SIX1Q15475 284 aaPredicted RBP16.49■□□□□ 0.23
CLIP4-201ENST00000320081 ZNF598Q86UK7 904 aaKnown RBP16.49■□□□□ 0.23
CLIP4-201ENST00000320081 CCDC103Q8IW40 242 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 C7orf43Q8WVR3 580 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 LRTOMTQ8WZ04 291 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 SCLYQ96I15 445 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 IQCF3P0C7M6 154 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 COX7A2P14406 83 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 XRCC1P18887 633 aaPredicted RBP16.49■□□□□ 0.23
CLIP4-201ENST00000320081 PSEN1P49768 467 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 TMEM110Q86TL2 294 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 MYH3P11055 1940 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 CICQ96RK0 1608 aaPredicted RBP16.49■□□□□ 0.23
CLIP4-201ENST00000320081 KPNA6O60684 536 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 UGT2B4P06133 528 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 GABRR2P28476 465 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 RUNX1T1Q06455 604 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 GALNT5Q7Z7M9 940 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 DEFB118Q96PH6 123 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 SIKE1Q9BRV8 207 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 KLHL25Q9H0H3 589 aa16.49■□□□□ 0.23
CLIP4-201ENST00000320081 FBRSL1Q9HCM7 1045 aaKnown RBP16.49■□□□□ 0.23
CLIP4-201ENST00000320081 FCF1Q9Y324 198 aaKnown RBP16.49■□□□□ 0.23
CLIP4-201ENST00000320081 MTF2Q9Y483 593 aaPredicted RBP16.49■□□□□ 0.23
CLIP4-201ENST00000320081 IVDP26440 423 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 RPL9P32969 192 aaKnown RBP16.48■□□□□ 0.23
CLIP4-201ENST00000320081 POLD2P49005 469 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 THOP1P52888 689 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 NUP107P57740 925 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 GRIK3Q13003 919 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 CAND1Q86VP6 1230 aaKnown RBP16.48■□□□□ 0.23
CLIP4-201ENST00000320081 AUTS2Q8WXX7 1259 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 C19orf60Q96EN9 201 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 TMEM106CQ9BVX2 250 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 FBXW11Q9UKB1 542 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 GJA1P17302 382 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 CORO1AP31146 461 aaKnown RBP16.48■□□□□ 0.23
CLIP4-201ENST00000320081 CRATP43155 626 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 SOX4Q06945 474 aaPredicted RBP16.48■□□□□ 0.23
CLIP4-201ENST00000320081 SLC10A2Q12908 348 aaPredicted RBP16.48■□□□□ 0.23
CLIP4-201ENST00000320081 KCNJ11Q14654 390 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 PRKD1Q15139 912 aaPredicted RBP16.48■□□□□ 0.23
CLIP4-201ENST00000320081 RGMBQ6NW40 437 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 CAMK1DQ8IU85 385 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 OR10Q1Q8NGQ4 319 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 APOLD1Q96LR9 279 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 FKBPLQ9UIM3 349 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 IGSF6O95976 241 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 GOT2P00505 430 aaKnown RBP16.48■□□□□ 0.23
CLIP4-201ENST00000320081 PIGRP01833 764 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 MLNP12872 115 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 ECT2LQ008S8 904 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 SQLEQ14534 574 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 SLC9A4Q6AI14 798 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 COL26A1Q96A83 441 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 SIGLEC10Q96LC7 697 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 OXCT2Q9BYC2 517 aaPredicted RBP16.48■□□□□ 0.23
CLIP4-201ENST00000320081 EIF2B4Q9UI10 523 aaKnown RBP16.48■□□□□ 0.23
CLIP4-201ENST00000320081 MYOCOSA0A1B0GUC4 107 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 FAM20BO75063 409 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 OR4F21O95013 312 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 AHSGP02765 367 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 SERPINA4P29622 427 aa16.48■□□□□ 0.23
CLIP4-201ENST00000320081 SP3Q02447 781 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms