RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 ASB3Q9Y575 518 aa20.63■□□□□ 0.89
TTC39C-202ENST00000317571 TBKBP1A7MCY6 615 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 PRLP01236 227 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 HSPA1AP0DMV8 641 aaKnown RBP20.62■□□□□ 0.89
TTC39C-202ENST00000317571 HSPA1BP0DMV9 641 aaKnown RBP20.62■□□□□ 0.89
TTC39C-202ENST00000317571 CDH13P55290 713 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 IRX1P78414 480 aaPredicted RBP20.62■□□□□ 0.89
TTC39C-202ENST00000317571 IL31Q6EBC2 164 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 NPAS4Q8IUM7 802 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 DENND1CQ8IV53 801 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 GDPD5Q8WTR4 605 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 L3HYPDHQ96EM0 354 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 VPS28Q9UK41 221 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 SIX3O95343 332 aaPredicted RBP20.62■□□□□ 0.89
TTC39C-202ENST00000317571 SERPINF2P08697 491 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 UBTFL6P0CB48 400 aaPredicted RBP20.62■□□□□ 0.89
TTC39C-202ENST00000317571 MTHFD2P13995 350 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 ZNF37AP17032 561 aaPredicted RBP20.62■□□□□ 0.89
TTC39C-202ENST00000317571 SUOXP51687 545 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 AQP4P55087 323 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 INHBCP55103 352 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 PTPRRQ15256 657 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 GABPB2Q8TAK5 448 aaPredicted RBP20.62■□□□□ 0.89
TTC39C-202ENST00000317571 CDKN2AIPNLQ96HQ2 116 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 C3orf30Q96M34 536 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 ZNF599Q96NL3 588 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 SPON2Q9BUD6 331 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 GKN1Q9NS71 199 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 COMMD8Q9NX08 183 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 DNMT3LQ9UJW3 386 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 PHF24Q9UPV7 400 aa20.62■□□□□ 0.89
TTC39C-202ENST00000317571 MAGEA13PA6NCF6 341 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 COCHO43405 550 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 SUPT7LO94864 414 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 NDST3O95803 873 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 CR2P20023 1033 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 ATP5C1P36542 298 aaKnown RBP20.61■□□□□ 0.89
TTC39C-202ENST00000317571 ZNF140P52738 457 aaPredicted RBP20.61■□□□□ 0.89
TTC39C-202ENST00000317571 ANKS3Q6ZW76 656 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 APLFQ8IW19 511 aaPredicted RBP20.61■□□□□ 0.89
TTC39C-202ENST00000317571 RYBPQ8N488 228 aaPredicted RBP20.61■□□□□ 0.89
TTC39C-202ENST00000317571 FAM156AQ8NDB6 213 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 MDGA1Q8NFP4 955 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 OR4L1Q8NH43 312 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 DDX50Q9BQ39 737 aaKnown RBP20.61■□□□□ 0.89
TTC39C-202ENST00000317571 PIDD1Q9HB75 910 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 FBRSL1Q9HCM7 1045 aaKnown RBP20.61■□□□□ 0.89
TTC39C-202ENST00000317571 CATSPERZQ9NTU4 200 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 LRFN2Q9ULH4 789 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 TRAF6Q9Y4K3 522 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 GBF1Q92538 1859 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 ATP6AP2A0A1C7CYW4 349 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 ZNF840PA6NDX5 716 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 FBP2O00757 339 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 SMIM24O75264 130 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 ATP6AP2O75787 350 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 SNUPNO95149 360 aaKnown RBP20.61■□□□□ 0.89
TTC39C-202ENST00000317571 SEC24AO95486 1093 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 SLC26A3P40879 764 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 STC1P52823 247 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 ATXN3P54252 364 aaPredicted RBP20.61■□□□□ 0.89
TTC39C-202ENST00000317571 GALNT1Q10472 559 aaPredicted RBP20.61■□□□□ 0.89
TTC39C-202ENST00000317571 BTG3Q14201 252 aaPredicted RBP20.61■□□□□ 0.89
TTC39C-202ENST00000317571 PTK2BQ14289 1009 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 TYSND1Q2T9J0 566 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 UGT3A2Q3SY77 523 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 SLC22A9Q8IVM8 553 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 TMA16Q96EY4 203 aaKnown RBP20.61■□□□□ 0.89
TTC39C-202ENST00000317571 PSKH2Q96QS6 385 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 MAGEH1Q9H213 219 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 PTGDR2Q9Y5Y4 395 aa20.61■□□□□ 0.89
TTC39C-202ENST00000317571 EME2A4GXA9 379 aaPredicted RBP20.6■□□□□ 0.89
TTC39C-202ENST00000317571 UBXN8O00124 270 aa20.6■□□□□ 0.89
TTC39C-202ENST00000317571 CASQ2O14958 399 aaPredicted RBP20.6■□□□□ 0.89
TTC39C-202ENST00000317571 RNASEH1O60930 286 aaKnown RBP20.6■□□□□ 0.89
TTC39C-202ENST00000317571 TRPA1O75762 1119 aa20.6■□□□□ 0.89
TTC39C-202ENST00000317571 EFEMP2O95967 443 aa20.6■□□□□ 0.89
TTC39C-202ENST00000317571 CDKN1CP49918 316 aaPredicted RBP20.6■□□□□ 0.89
TTC39C-202ENST00000317571 NFKB2Q00653 900 aa20.6■□□□□ 0.89
TTC39C-202ENST00000317571 OR9I1Q8NGQ6 314 aa20.6■□□□□ 0.89
TTC39C-202ENST00000317571 PEX13Q92968 403 aa20.6■□□□□ 0.89
TTC39C-202ENST00000317571 SCLYQ96I15 445 aa20.6■□□□□ 0.89
TTC39C-202ENST00000317571 NSUN5Q96P11 429 aaKnown RBP20.6■□□□□ 0.89
TTC39C-202ENST00000317571 AARSD1Q9BTE6 412 aaKnown RBP20.6■□□□□ 0.89
TTC39C-202ENST00000317571 EFCAB1Q9HAE3 211 aa20.6■□□□□ 0.89
TTC39C-202ENST00000317571 EML4Q9HC35 981 aaKnown RBP20.6■□□□□ 0.89
TTC39C-202ENST00000317571 ZDHHC7Q9NXF8 308 aa20.6■□□□□ 0.89
TTC39C-202ENST00000317571 A0A0U1RQS6 177 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 H7C4K7 107 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 HMGA1P17096 107 aaKnown RBP20.59■□□□□ 0.89
TTC39C-202ENST00000317571 OR1D2P34982 312 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 SCNN1BP51168 640 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 SH3BP2P78314 561 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 MRPS22P82650 360 aaKnown RBP20.59■□□□□ 0.89
TTC39C-202ENST00000317571 RFTN1Q14699 578 aaPredicted RBP20.59■□□□□ 0.89
TTC39C-202ENST00000317571 TRIP10Q15642 601 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 EP400NLQ6ZTU2 488 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 PTGR2Q8N8N7 351 aaPredicted RBP20.59■□□□□ 0.89
TTC39C-202ENST00000317571 PXYLP1Q8TE99 480 aa20.59■□□□□ 0.89
TTC39C-202ENST00000317571 ZNF512Q96ME7 567 aaPredicted RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms