RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 FATE1Q969F0 183 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 MRGPRX2Q96LB1 330 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 COQ10AQ96MF6 247 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 AKAP13Q12802 2813 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 GOLGA6CA6NDK9 693 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 GOLGA6BA6NDN3 693 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 ZNF185O15231 689 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 FFAR2O15552 330 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 SOD1P00441 154 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 GOLGA6DP0CG33 693 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 VIPR1P32241 457 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 KCNJ1P48048 391 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 POLD2P49005 469 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 EPHB1P54762 984 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 COPS2P61201 443 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 ELP6Q0PNE2 266 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 DNAJC3Q13217 504 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 GRM3Q14832 879 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 LRRC14Q15048 493 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 RPS6KA1Q15418 735 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 ZNF423Q2M1K9 1284 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 ZNF648Q5T619 568 aaPredicted RBP12.06□□□□□ -0.48
SCFD1-201ENST00000311943 EID2Q8N6I1 236 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 UBL4BQ8N7F7 174 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 IPMKQ8NFU5 416 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 SAP25Q8TEE9 199 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 MCCC1Q96RQ3 725 aaPredicted RBP12.06□□□□□ -0.48
SCFD1-201ENST00000311943 TSGA10Q9BZW7 698 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 SLC25A51Q9H1U9 297 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 BPIFA1Q9NP55 256 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 GDF3Q9NR23 364 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 GPR27Q9NS67 375 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 DNAJC28Q9NX36 388 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 GOLGA6AQ9NYA3 693 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 PHTF1Q9UMS5 762 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 A6NNZ2 444 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 MIF4GDA9UHW6 222 aaKnown RBP12.05□□□□□ -0.48
SCFD1-201ENST00000311943 ANKRD66B4E2M5 251 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 TRIM38O00635 465 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 FPGTO14772 594 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 CBFA2T3O75081 653 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 GCATO75600 419 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 TJP3O95049 919 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 ATXN1LP0C7T5 689 aaKnown RBP12.05□□□□□ -0.48
SCFD1-201ENST00000311943 PTPN7P35236 360 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 TERF1P54274 439 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 WNT3AP56704 352 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 CCDC15Q0P6D6 951 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 ZNF569Q5MCW4 686 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 ANKRD20A2Q5SQ80 823 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 N4BP2L1Q5TBK1 243 aaPredicted RBP12.05□□□□□ -0.48
SCFD1-201ENST00000311943 ANKRD20A1Q5TYW2 823 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 ANKRD20A3Q5VUR7 823 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 KANSL1Q7Z3B3 1105 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 SLC13A5Q86YT5 568 aaPredicted RBP12.05□□□□□ -0.48
SCFD1-201ENST00000311943 NAXDQ8IW45 347 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 CCL4L1Q8NHW4 92 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 SLC35B2Q8TB61 432 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 HCAR2Q8TDS4 363 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 COG1Q8WTW3 980 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 PDXPQ96GD0 296 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 RTKNQ9BST9 563 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 PCOLCE2Q9UKZ9 415 aa12.05□□□□□ -0.48
SCFD1-201ENST00000311943 SPTY2D1-AS1A0A0U1RR47 76 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 INPP4BO15327 924 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 POLR2LP62875 67 aaKnown RBP12.04□□□□□ -0.48
SCFD1-201ENST00000311943 ALS2CLQ60I27 953 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 KYAT3Q6YP21 454 aaKnown RBP12.04□□□□□ -0.48
SCFD1-201ENST00000311943 ZNF662Q6ZS27 426 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 TECPR1Q7Z6L1 1165 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 SLCO6A1Q86UG4 719 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 RHBDD1Q8TEB9 315 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 APOOQ9BUR5 198 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 FGF22Q9HCT0 170 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 RSPH14Q9UHP6 348 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 PPIL1Q9Y3C6 166 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 PLEKHM1Q9Y4G2 1056 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 KCTD3Q9Y597 815 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 ST14Q9Y5Y6 855 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 CACNA1AO00555 2505 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 C1orf232A0A0U1RR37 186 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 CAPN8A6NHC0 703 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 CER1O95813 267 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 DGKAP23743 735 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 EPHA8P29322 1005 aaPredicted RBP12.04□□□□□ -0.48
SCFD1-201ENST00000311943 CDK18Q07002 472 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 MTM1Q13496 603 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 SIRPB2Q5JXA9 342 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 ENPP7Q6UWV6 458 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 DBX2Q6ZNG2 339 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 RABEPKQ7Z6M1 372 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 CLPBQ9H078 707 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 TOR4AQ9NXH8 423 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 EFR3BQ9Y2G0 817 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 TMEM98Q9Y2Y6 226 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 PRKAB1Q9Y478 270 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 HS3ST3A1Q9Y663 406 aa12.04□□□□□ -0.48
SCFD1-201ENST00000311943 CCDC78A2IDD5 438 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 FADS2P1A8MWK0 482 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 CCL22O00626 93 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms