RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 TTC39CQ8N584 583 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 LRRC52Q8N7C0 313 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 OR6P1Q8NGX9 317 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 HM13Q8TCT9 377 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 DPF3Q92784 378 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 PCED1BQ96HM7 432 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 KLHL5Q96PQ7 755 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 TUBB1Q9H4B7 451 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 MID1IP1Q9NPA3 183 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 TCAF1Q9Y4C2 921 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 MAGEB16A2A368 324 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 FAM155AB1AL88 458 aaPredicted RBP13.47□□□□□ -0.25
CCDC13-201ENST00000310232 UBXN8O00124 270 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 TOR1BO14657 336 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 IL7RP16871 459 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 MYF6P23409 242 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 SLC6A2P23975 617 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 PSMD8P48556 350 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 TAF6P49848 677 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 RELAQ04206 551 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 DHRS4L2Q6PKH6 230 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 ITIH5Q86UX2 942 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 PAAF1Q9BRP4 392 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 C1orf50Q9BV19 199 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 SLC39A8Q9C0K1 460 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 FANCEQ9HB96 536 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 SLC27A5Q9Y2P5 690 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 SQORQ9Y6N5 450 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 ZSWIM8A7E2V4 1837 aa13.47□□□□□ -0.25
CCDC13-201ENST00000310232 NCF1BA6NI72 391 aaPredicted RBP13.46□□□□□ -0.25
CCDC13-201ENST00000310232 NCF1CA8MVU1 366 aaPredicted RBP13.46□□□□□ -0.25
CCDC13-201ENST00000310232 ZNF189O75820 626 aaPredicted RBP13.46□□□□□ -0.25
CCDC13-201ENST00000310232 NCF1P14598 390 aaPredicted RBP13.46□□□□□ -0.25
CCDC13-201ENST00000310232 TCF3P15923 654 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 PRDX3P30048 256 aaKnown RBP13.46□□□□□ -0.25
CCDC13-201ENST00000310232 SHMT2P34897 504 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 CD97P48960 835 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 CCT8P50990 548 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 TUBA4AP68366 448 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 TRAP1Q12931 704 aaKnown RBP13.46□□□□□ -0.25
CCDC13-201ENST00000310232 ITGADQ13349 1161 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 UNC50Q53HI1 259 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 CYBRD1Q53TN4 286 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 PAGE3Q5JUK9 113 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 RALGPS2Q86X27 583 aaPredicted RBP13.46□□□□□ -0.25
CCDC13-201ENST00000310232 HS3ST5Q8IZT8 346 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 C2CD4AQ8NCU7 369 aaPredicted RBP13.46□□□□□ -0.25
CCDC13-201ENST00000310232 PPHLN1Q8NEY8 458 aaKnown RBP13.46□□□□□ -0.25
CCDC13-201ENST00000310232 SCAMP5Q8TAC9 235 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 TRPC4APQ8TEL6 797 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 MUS81Q96NY9 551 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 CSF3RQ99062 836 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 HNRNPABQ99729 332 aaKnown RBP13.46□□□□□ -0.25
CCDC13-201ENST00000310232 PIM2Q9P1W9 311 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 TSR3Q9UJK0 312 aaKnown RBP13.46□□□□□ -0.25
CCDC13-201ENST00000310232 TNS1Q9HBL0 1735 aaKnown RBP13.46□□□□□ -0.25
CCDC13-201ENST00000310232 FASP25445 335 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 SLC26A2P50443 739 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 ITKQ08881 620 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 PFKFB4Q16877 469 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 HECTD2Q5U5R9 776 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 ALKAL1Q6UXT8 129 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 IFNLR1Q8IU57 520 aaPredicted RBP13.46□□□□□ -0.25
CCDC13-201ENST00000310232 CAMK1DQ8IU85 385 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 ARHGAP12Q8IWW6 846 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 ACDQ96AP0 544 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 TUBGCP3Q96CW5 907 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 MRGPRX2Q96LB1 330 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 PPP1R10Q96QC0 940 aaKnown RBP13.46□□□□□ -0.25
CCDC13-201ENST00000310232 INTS7Q9NVH2 962 aaKnown RBP13.46□□□□□ -0.25
CCDC13-201ENST00000310232 RBM22Q9NW64 420 aaKnown RBP eCLIP13.46□□□□□ -0.25
CCDC13-201ENST00000310232 CSADQ9Y600 493 aa13.46□□□□□ -0.25
CCDC13-201ENST00000310232 XYLBO75191 536 aa13.46□□□□□ -0.26
CCDC13-201ENST00000310232 STX1BP61266 288 aa13.46□□□□□ -0.26
CCDC13-201ENST00000310232 CACNB2Q08289 660 aaPredicted RBP13.46□□□□□ -0.26
CCDC13-201ENST00000310232 BFSP2Q13515 415 aa13.46□□□□□ -0.26
CCDC13-201ENST00000310232 FAM45BPQ6NSW5 357 aa13.46□□□□□ -0.26
CCDC13-201ENST00000310232 TAPT1Q6NXT6 567 aa13.46□□□□□ -0.26
CCDC13-201ENST00000310232 PDZD4Q76G19 769 aaPredicted RBP13.46□□□□□ -0.26
CCDC13-201ENST00000310232 ATPAF2Q8N5M1 289 aa13.46□□□□□ -0.26
CCDC13-201ENST00000310232 FAM45AQ8TCE6 357 aa13.46□□□□□ -0.26
CCDC13-201ENST00000310232 HASPINQ8TF76 798 aa13.46□□□□□ -0.26
CCDC13-201ENST00000310232 LZICQ8WZA0 190 aa13.46□□□□□ -0.26
CCDC13-201ENST00000310232 PABPC5Q96DU9 382 aaKnown RBP13.46□□□□□ -0.26
CCDC13-201ENST00000310232 TBC1D23Q9NUY8 699 aa13.46□□□□□ -0.26
CCDC13-201ENST00000310232 TBC1D13Q9NVG8 400 aa13.46□□□□□ -0.26
CCDC13-201ENST00000310232 IFT80Q9P2H3 777 aaPredicted RBP13.46□□□□□ -0.26
CCDC13-201ENST00000310232 TRHDEQ9UKU6 1024 aa13.46□□□□□ -0.26
CCDC13-201ENST00000310232 UBQLN1Q9UMX0 589 aaKnown RBP13.46□□□□□ -0.26
CCDC13-201ENST00000310232 ST14Q9Y5Y6 855 aa13.46□□□□□ -0.26
CCDC13-201ENST00000310232 RAD54BQ9Y620 910 aa13.46□□□□□ -0.26
CCDC13-201ENST00000310232 DNAJC25-GNG10A0A024R161 153 aa13.45□□□□□ -0.26
CCDC13-201ENST00000310232 TRIM43BA6NCK2 446 aa13.45□□□□□ -0.26
CCDC13-201ENST00000310232 ANGPT2O15123 496 aa13.45□□□□□ -0.26
CCDC13-201ENST00000310232 RSL1D1O76021 490 aaKnown RBP13.45□□□□□ -0.26
CCDC13-201ENST00000310232 CDK14O94921 469 aa13.45□□□□□ -0.26
CCDC13-201ENST00000310232 LTA4HP09960 611 aaKnown RBP13.45□□□□□ -0.26
CCDC13-201ENST00000310232 HGFP14210 728 aa13.45□□□□□ -0.26
CCDC13-201ENST00000310232 PSMA4P25789 261 aaKnown RBP13.45□□□□□ -0.26
CCDC13-201ENST00000310232 HMOX2P30519 316 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms