RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 UNC93AQ86WB7 457 aa14.41□□□□□ -0.1
SCUBE2-201ENST00000309263 SLC15A3Q8IY34 581 aa14.41□□□□□ -0.1
SCUBE2-201ENST00000309263 PTGR2Q8N8N7 351 aaPredicted RBP14.41□□□□□ -0.1
SCUBE2-201ENST00000309263 COLEC11Q9BWP8 271 aa14.41□□□□□ -0.1
SCUBE2-201ENST00000309263 IFT80Q9P2H3 777 aaPredicted RBP14.41□□□□□ -0.1
SCUBE2-201ENST00000309263 CNOT11Q9UKZ1 510 aaKnown RBP14.41□□□□□ -0.1
SCUBE2-201ENST00000309263 GNGT2O14610 69 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 SLC22A2O15244 555 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 LTA4HP09960 611 aaKnown RBP14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 IL7RP16871 459 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 CAPN3P20807 821 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 RPS9P46781 194 aaKnown RBP14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 CD97P48960 835 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 PRKAA2P54646 552 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 OTUD1Q5VV17 481 aaPredicted RBP14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 DCDC5Q6ZRR9 648 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 TFAP2DQ7Z6R9 452 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 OSTM1Q86WC4 334 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 ZFP42Q96MM3 310 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 MUS81Q96NY9 551 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 TXNRD2Q9NNW7 524 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 MPP6Q9NZW5 540 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 RCOR3Q9P2K3 495 aaPredicted RBP14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 TRHDEQ9UKU6 1024 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 BPTFQ12830 3046 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 TMEM247A6NEH6 219 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 ADM5C9JUS6 153 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 UBFD1O14562 309 aaKnown RBP14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 DAB1O75553 588 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 ADCYAP1R1P41586 468 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 HALP42357 657 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 KCNC1P48547 511 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 VGLL4Q14135 290 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 SPIDRQ14159 915 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 USP41Q3LFD5 358 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 PLA2G4EQ3MJ16 856 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 TIGD2Q4W5G0 525 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 PIWIL3Q7Z3Z3 882 aaKnown RBP14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 FUNDC1Q8IVP5 155 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 MIER2Q8N344 545 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 TBC1D15Q8TC07 691 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 SEPT8Q92599 483 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 ISL2Q96A47 359 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 DUSP16Q9BY84 665 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 INIPQ9NRY2 104 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 SMPD3Q9NY59 655 aaPredicted RBP14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 ZNF232Q9UNY5 417 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 NPHS1O60500 1241 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 MATN1P21941 496 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 RAD23AP54725 363 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 PTPRCAPQ14761 206 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 RIOX2Q8IUF8 465 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 LZTR1Q8N653 840 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 SMG8Q8ND04 991 aaKnown RBP14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 IRGQQ8WZA9 623 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 CENPNQ96H22 339 aaPredicted RBP14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 GPR78Q96P69 363 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 AAR2Q9Y312 384 aaKnown RBP14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 RAD54BQ9Y620 910 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 MGAMO43451 1857 aa14.4□□□□□ -0.1
SCUBE2-201ENST00000309263 SMIM28A0A1B0GU29 152 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 LDLRP01130 860 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 TRAP1Q12931 704 aaKnown RBP14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 CLEC20AQ6ZU45 233 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 BRD8Q9H0E9 1235 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 SLAMF8Q9P0V8 285 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 TMEM181Q9P2C4 612 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 IPO11Q9UI26 975 aaKnown RBP14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 UBQLN1Q9UMX0 589 aaKnown RBP14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 GRM5P41594 1212 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 BCAP31P51572 246 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 IST1P53990 364 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 SOX4Q06945 474 aaPredicted RBP14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 POLD3Q15054 466 aaPredicted RBP14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 SAPCD2Q86UD0 394 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 PELI3Q8N2H9 469 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 HASPINQ8TF76 798 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 KLHL5Q96PQ7 755 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 CCM2LQ9NUG4 571 aaPredicted RBP14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 ZNF487B1APH4 448 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 UBXN8O00124 270 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 MSI1O43347 362 aaKnown RBP14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 XYLBO75191 536 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 CYP2C9P11712 490 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 KCTD11Q693B1 232 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 DNAJC14Q6Y2X3 702 aaPredicted RBP14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 SH3RF2Q8TEC5 729 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 NRBF2Q96F24 287 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 FAR2Q96K12 515 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 NT5MQ9NPB1 228 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 SACM1LQ9NTJ5 587 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 CPA4Q9UI42 421 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 FAM50BQ9Y247 325 aa14.39□□□□□ -0.11
SCUBE2-201ENST00000309263 COL11A1P12107 1806 aaPredicted RBP14.38□□□□□ -0.11
SCUBE2-201ENST00000309263 SUPT3HB4E1H0 165 aa14.38□□□□□ -0.11
SCUBE2-201ENST00000309263 TARM1B6A8C7 271 aa14.38□□□□□ -0.11
SCUBE2-201ENST00000309263 NCAM2O15394 837 aa14.38□□□□□ -0.11
SCUBE2-201ENST00000309263 MTSS1O43312 755 aa14.38□□□□□ -0.11
SCUBE2-201ENST00000309263 SLC27A1Q6PCB7 646 aa14.38□□□□□ -0.11
SCUBE2-201ENST00000309263 GLT1D1Q96MS3 346 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms