RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 SNX27Q96L92 541 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 C3orf30Q96M34 536 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 OLFM1Q99784 485 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 COLEC11Q9BWP8 271 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 TUT1Q9H6E5 874 aaKnown RBP11.17□□□□□ -0.62
PTPN7-201ENST00000309017 SUN2Q9UH99 717 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 PHIPQ8WWQ0 1821 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 SHROOM3Q8TF72 1996 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 KANSL1LA0AUZ9 987 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 FAM155AB1AL88 458 aaPredicted RBP11.16□□□□□ -0.62
PTPN7-201ENST00000309017 ZNF701M0R085 212 aaPredicted RBP11.16□□□□□ -0.62
PTPN7-201ENST00000309017 PIP5K1BO14986 540 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 SIX3O95343 332 aaPredicted RBP11.16□□□□□ -0.62
PTPN7-201ENST00000309017 NFATC3Q12968 1075 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 CYP2A13Q16696 494 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 PFKFB4Q16877 469 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 SLC36A3Q495N2 470 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 SV2CQ496J9 727 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 OTUD1Q5VV17 481 aaPredicted RBP11.16□□□□□ -0.62
PTPN7-201ENST00000309017 WSCD1Q658N2 575 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 CLYBLQ8N0X4 340 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 TRPV3Q8NET8 790 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 CALML6Q8TD86 181 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.16□□□□□ -0.62
PTPN7-201ENST00000309017 UHRF1Q96T88 793 aaPredicted RBP11.16□□□□□ -0.62
PTPN7-201ENST00000309017 RAD21L1Q9H4I0 556 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 CD320Q9NPF0 282 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 AGPAT4Q9NRZ5 378 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 BBIP1A8MTZ0 92 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 GNGT2O14610 69 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 JAK1P23458 1154 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 PSMD8P48556 350 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 ATP6V0D1P61421 351 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 GALNT2Q10471 571 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 IMPG1Q17R60 797 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 CCNYL2Q5T2Q4 361 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 NOTUMQ6P988 496 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 ZUFSPQ96AP4 578 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 OTUD5Q96G74 571 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 ALG2Q9H553 416 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 GLOD4Q9HC38 313 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 ACTR3BQ9P1U1 418 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 FBXW11Q9UKB1 542 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 H3BRB1 525 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 ALDOCP09972 364 aaKnown RBP11.16□□□□□ -0.62
PTPN7-201ENST00000309017 CAPN3P20807 821 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 HECTD2Q5U5R9 776 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 BROXQ5VW32 411 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 ANKRD26P1Q6NSI1 321 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 SCIMPQ6UWF3 145 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 FUNDC1Q8IVP5 155 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 TWIST2Q8WVJ9 160 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 LRRC58Q96CX6 371 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 GLT1D1Q96MS3 346 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 BDH2Q9BUT1 245 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 IGSF5Q9NSI5 407 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 SNX5Q9Y5X3 404 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 RAD54BQ9Y620 910 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 BPTFQ12830 3046 aa11.16□□□□□ -0.62
PTPN7-201ENST00000309017 NFKBIAP25963 317 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 ACADVLP49748 655 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 RAD23AP54725 363 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 PFKPQ01813 784 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 LIPEQ05469 1076 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 GRB7Q14451 532 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 AASDHQ4L235 1098 aaPredicted RBP11.15□□□□□ -0.62
PTPN7-201ENST00000309017 CLEC20AQ6ZU45 233 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 OSCP1Q8WVF1 389 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 TAMM41Q96BW9 452 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 KCNA7Q96RP8 456 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 CMTM6Q9NX76 183 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 SARDHQ9UL12 918 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 VWA7Q9Y334 891 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 KPNA4O00629 521 aaPredicted RBP11.15□□□□□ -0.62
PTPN7-201ENST00000309017 RASAL1O95294 804 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 GPIP06744 558 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 LBPP18428 481 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 DCKP27707 260 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 GSK3BP49841 420 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 RAB15P59190 212 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 ATP6AP1Q15904 470 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 PIM3Q86V86 326 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 OSTM1Q86WC4 334 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 ANKRD49Q8WVL7 239 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 FEM1CQ96JP0 617 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 MUS81Q96NY9 551 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 ADAMTS10Q9H324 1103 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 ENTPD7Q9NQZ7 604 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 GNPTGQ9UJJ9 305 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 ZNF232Q9UNY5 417 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 COMMD10Q9Y6G5 202 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 MGAMO43451 1857 aa11.15□□□□□ -0.62
PTPN7-201ENST00000309017 SMIM28A0A1B0GU29 152 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 TMEM221A6NGB7 291 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 SUPT3HB4E1H0 165 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 PTGES3LE9PB15 166 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 AZIN1O14977 448 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 SERPINB7O75635 380 aa11.15□□□□□ -0.63
PTPN7-201ENST00000309017 RSL1D1O76021 490 aaKnown RBP11.15□□□□□ -0.63
PTPN7-201ENST00000309017 BDNFP23560 247 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms