RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 OXNAD1Q96HP4 312 aaPredicted RBP11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 LYSMD1Q96S90 227 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 FICDQ9BVA6 458 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 GPR63Q9BZJ6 419 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 KCND1Q9NSA2 647 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 RXFP3Q9NSD7 469 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PKD2L2Q9NZM6 624 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PAK5Q9P286 719 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 POM121BA6NF01 834 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 GOLGA8CPA6NN73 597 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 C4orf47A7E2U8 309 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 E7EVH7 732 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 H3BM21 787 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PSMD3O43242 534 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 EPOP01588 193 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 HTR1BP28222 390 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 FDFT1P37268 417 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ETV3P41162 512 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 CTSKP43235 329 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ARRB1P49407 418 aaPredicted RBP11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 YPEL5P62699 121 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 MTM1Q13496 603 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PDE1CQ14123 709 aaPredicted RBP11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 IHHQ14623 411 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SLC1A5Q15758 541 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 WSCD2Q2TBF2 565 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 HLA-BQ31612 363 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 INAVAQ3KP66 663 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 RAET1GQ6H3X3 334 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 DRICH1Q6PGQ1 229 aaPredicted RBP11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 C4orf22Q6V702 233 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 GLT6D1Q7Z4J2 308 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 OR2I1PQ8NGU4 316 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ATL2Q8NHH9 583 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ACTRT1Q8TDG2 376 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 CENPTQ96BT3 561 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 RTP4Q96DX8 246 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 MS4A14Q96JA4 679 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 MRGPRX2Q96LB1 330 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 COQ10AQ96MF6 247 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 TRIB3Q96RU7 358 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 WDR24Q96S15 920 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ELF4Q99607 663 aaPredicted RBP11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 KLF6Q99612 283 aaPredicted RBP11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 TBL1YQ9BQ87 522 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 LRRC40Q9H9A6 602 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ZFYVE1Q9HBF4 777 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 MAGEE1Q9HCI5 957 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 DNAAF2Q9NVR5 837 aaKnown RBP11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 HACD3Q9P035 362 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 TTC7AQ9ULT0 858 aaPredicted RBP11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ZNF711Q9Y462 761 aa11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 RIF1Q5UIP0 2472 aaKnown RBP11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ASCC3Q8N3C0 2202 aaKnown RBP11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PTPRZ1P23471 2315 aaPredicted RBP11□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ZFC3H1O60293 1989 aaKnown RBP10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 EP300Q09472 2414 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 LOC285095A0A1B0GVY8 99 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 CACNB4O00305 520 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 CDX4O14627 284 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 CLDN7O95471 211 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PYGLP06737 847 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 C1SP09871 688 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PIRTP0C851 137 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ZNF883P0CG24 379 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 TSHRP16473 764 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 CASQ1P31415 396 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 GPR1P46091 355 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 STC1P52823 247 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PFN3P60673 137 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 BNC1Q01954 994 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 INPP5AQ14642 412 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SUZ12Q15022 739 aaKnown RBP10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PTPRRQ15256 657 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 RSPO4Q2I0M5 234 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ZNF423Q2M1K9 1284 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SIRPB2Q5JXA9 342 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 FAXCQ5TGI0 409 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ESRP1Q6NXG1 681 aaKnown RBP10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 LYSMD3Q7Z3D4 306 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 HSD11B1LQ7Z5J1 315 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PARGQ86W56 976 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 RAVER1Q8IY67 606 aaKnown RBP10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 NRSN1Q8IZ57 195 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 C17orf53Q8N3J3 647 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 BLOC1S5Q8TDH9 187 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 GRK7Q8WTQ7 553 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 COG1Q8WTW3 980 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 MAGOHBQ96A72 148 aaKnown RBP10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 AP2M1Q96CW1 435 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 CAPZA3Q96KX2 299 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 BMFQ96LC9 184 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SMIM14Q96QK8 99 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 AP1M1Q9BXS5 423 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 TRABDQ9H4I3 376 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 WDR26Q9H7D7 661 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ERVMER34-1Q9H9K5 563 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 MBNL1Q9NR56 388 aaKnown RBP10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PHPT1Q9NRX4 125 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 RAD18Q9NS91 495 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms