RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 SLC46A2Q9BY10 475 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.4□□□□□ -0.58
SCG2-201ENST00000305409 POLR3BQ9NW08 1133 aaPredicted RBP11.4□□□□□ -0.58
SCG2-201ENST00000305409 EVLQ9UI08 416 aaPredicted RBP11.4□□□□□ -0.58
SCG2-201ENST00000305409 MYOFQ9NZM1 2061 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 ANAPC1Q9H1A4 1944 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 LRRC14BA6NHZ5 514 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 EPOP01588 193 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 CTSAP10619 480 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 CD70P32970 193 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 RFC2P35250 354 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 CTSOP43234 321 aaPredicted RBP11.4□□□□□ -0.58
SCG2-201ENST00000305409 FAM83EQ2M2I3 478 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 ALG1LQ6GMV1 187 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 PSAPL1Q6NUJ1 521 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 TMC8Q8IU68 726 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 KREMEN2Q8NCW0 462 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 MICAL1Q8TDZ2 1067 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 WDR60Q8WVS4 1066 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 SREK1Q8WXA9 508 aaKnown RBP11.4□□□□□ -0.58
SCG2-201ENST00000305409 PTERQ96BW5 349 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 MRPL57Q9BQC6 102 aaKnown RBP11.4□□□□□ -0.58
SCG2-201ENST00000305409 DRC3Q9H069 523 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 GTSE1Q9NYZ3 720 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 LHX3Q9UBR4 397 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 SH3BP1Q9Y3L3 701 aa11.4□□□□□ -0.58
SCG2-201ENST00000305409 A0A087X1B8 175 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 ANKRD66B4E2M5 251 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 TRAFD1O14545 582 aaPredicted RBP11.39□□□□□ -0.59
SCG2-201ENST00000305409 SKAP2O75563 359 aaPredicted RBP11.39□□□□□ -0.59
SCG2-201ENST00000305409 SORBS2O94875 1100 aaKnown RBP11.39□□□□□ -0.59
SCG2-201ENST00000305409 LTA4HP09960 611 aaKnown RBP11.39□□□□□ -0.59
SCG2-201ENST00000305409 DNAJB1P25685 340 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 STK19P49842 368 aaPredicted RBP11.39□□□□□ -0.59
SCG2-201ENST00000305409 ZNF140P52738 457 aaPredicted RBP11.39□□□□□ -0.59
SCG2-201ENST00000305409 EPHB1P54762 984 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 ACCSLQ4AC99 568 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 TECRLQ5HYJ1 363 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 SH2D4BQ5SQS7 431 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 EPGNQ6UW88 154 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 Q6ZNB5 142 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 ITIH5Q86UX2 942 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 CMTM8Q8IZV2 173 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 CEP295NLQ96MC4 621 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 HSFX1Q9UBD0 423 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 TAGLN3Q9UI15 199 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 A8MT66 165 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 IQCF5A8MTL0 148 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 H3BMM5 538 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 PPP6CO00743 305 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 GRID2O43424 1007 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 APOA4P06727 396 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 COL6A2P12110 1019 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 SYN1P17600 705 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 SERPINB5P36952 375 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 RPL14P50914 215 aaKnown RBP11.39□□□□□ -0.59
SCG2-201ENST00000305409 CDH13P55290 713 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 NTHL1P78549 312 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 MTA1Q13330 715 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 KPNB1Q14974 876 aaKnown RBP11.39□□□□□ -0.59
SCG2-201ENST00000305409 ZRANB3Q5FWF4 1079 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 RALGPS1Q5JS13 557 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 AGAP9Q5VTM2 703 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 MRNIPQ6NTE8 343 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 NECAB2Q7Z6G3 386 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 HJURPQ8NCD3 748 aaPredicted RBP11.39□□□□□ -0.59
SCG2-201ENST00000305409 EID2BQ96D98 161 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 ALG14Q96F25 216 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 SLC30A3Q99726 388 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 THTPAQ9BU02 230 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 LRRC3Q9BY71 257 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 DNAJC28Q9NX36 388 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 NCKIPSDQ9NZQ3 722 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.39□□□□□ -0.59
SCG2-201ENST00000305409 PACSIN3Q9UKS6 424 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 OR51B4Q9Y5P0 310 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 HCFC2Q9Y5Z7 792 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 REV3LO60673 3130 aa11.39□□□□□ -0.59
SCG2-201ENST00000305409 ANKRD12Q6UB98 2062 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 TMEM114B3SHH9 223 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 SPECC1L-ADORA2AF8WAN1 911 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 KIAA0355O15063 1070 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 SIX3O95343 332 aaPredicted RBP11.38□□□□□ -0.59
SCG2-201ENST00000305409 CRTAMO95727 393 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 MC4RP32245 332 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 PGM1P36871 562 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 ACVR1Q04771 509 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 LMAN2Q12907 356 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 KHDC1Q4VXA5 237 aaKnown RBP11.38□□□□□ -0.59
SCG2-201ENST00000305409 PABPC1LQ4VXU2 614 aaKnown RBP11.38□□□□□ -0.59
SCG2-201ENST00000305409 NCEH1Q6PIU2 408 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 ISCA2Q86U28 154 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 SNX31Q8N9S9 440 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 UBXN10Q96LJ8 280 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 FAM161BQ96MY7 647 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 DDX50Q9BQ39 737 aaKnown RBP11.38□□□□□ -0.59
SCG2-201ENST00000305409 SARS2Q9NP81 518 aaKnown RBP11.38□□□□□ -0.59
SCG2-201ENST00000305409 IKZF3Q9UKT9 509 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 RAP2CQ9Y3L5 183 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 CHD5Q8TDI0 1954 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms