RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 CUZD1Q86UP6 607 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 ZC3H7AQ8IWR0 971 aaKnown RBP7.65□□□□□ -1.19
SF3B3-201ENST00000302516 DSELQ8IZU8 1212 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 ZNF513Q8N8E2 541 aaPredicted RBP7.65□□□□□ -1.19
SF3B3-201ENST00000302516 EDEM1Q92611 657 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 SPATC1LQ9H0A9 340 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 TUT1Q9H6E5 874 aaKnown RBP7.65□□□□□ -1.19
SF3B3-201ENST00000302516 PTCH2Q9Y6C5 1203 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 METTL21EPA6NDL7 271 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 DCDC2CA8MYV0 355 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 NDUFB5O43674 189 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 ATF6P18850 670 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 CLK2P49760 499 aaKnown RBP7.65□□□□□ -1.19
SF3B3-201ENST00000302516 POLR2JP52435 117 aaKnown RBP7.65□□□□□ -1.19
SF3B3-201ENST00000302516 RPL38P63173 70 aaKnown RBP7.65□□□□□ -1.19
SF3B3-201ENST00000302516 PITPNAQ00169 270 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 SEZ6Q53EL9 994 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 BRMS1LQ5PSV4 323 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 DDI2Q5TDH0 399 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 UNC5AQ6ZN44 842 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 ANKRD52Q8NB46 1076 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 FAM13CQ8NE31 585 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 PANX1Q96RD7 426 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 EVA1BQ9NVM1 165 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 SHMT1P34896 483 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 GMPSP49915 693 aaPredicted RBP7.65□□□□□ -1.19
SF3B3-201ENST00000302516 PABPC1LQ4VXU2 614 aaKnown RBP7.65□□□□□ -1.19
SF3B3-201ENST00000302516 LIN52Q52LA3 116 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 IRAK1BP1Q5VVH5 260 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 CNSTQ6PJW8 725 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 PTF1AQ7RTS3 328 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 IQCKQ8N0W5 287 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 FDXACB1Q9BRP7 624 aaPredicted RBP7.65□□□□□ -1.19
SF3B3-201ENST00000302516 TMEM106CQ9BVX2 250 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 TRPV5Q9NQA5 729 aa7.65□□□□□ -1.19
SF3B3-201ENST00000302516 PAK6Q9NQU5 681 aaPredicted RBP7.65□□□□□ -1.19
SF3B3-201ENST00000302516 TDRKHQ9Y2W6 561 aaKnown RBP7.65□□□□□ -1.19
SF3B3-201ENST00000302516 KCNK1O00180 336 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 SLC22A1O15245 554 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 SCELO95171 688 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 MT-CO1P00395 513 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 FABP3P05413 133 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 SP100P23497 879 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-201ENST00000302516 MATKP42679 507 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 SLC7A2P52569 658 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 C3orf67Q6ZVT6 689 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 GPR180Q86V85 440 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 PEX5LQ8IYB4 626 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 CAMKK1Q8N5S9 505 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 PACRGLQ8N7B6 248 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 HJURPQ8NCD3 748 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-201ENST00000302516 MARK4Q96L34 752 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 CLCC1Q96S66 551 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 INTS7Q9NVH2 962 aaKnown RBP7.64□□□□□ -1.19
SF3B3-201ENST00000302516 ATF5Q9Y2D1 282 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-201ENST00000302516 RFXANKO14593 260 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 PNLIPRP1P54315 467 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 IRF8Q02556 426 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 CCNIQ14094 377 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 IL18Q14116 193 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 SULT1C3Q6IMI6 304 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 ADGRD1Q6QNK2 874 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 P2RY8Q86VZ1 359 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 IPCEF1Q8WWN9 437 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-201ENST00000302516 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.64□□□□□ -1.192e-7■■■■□ 23.4
SF3B3-201ENST00000302516 NUDT4Q9NZJ9 180 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 TRAF6Q9Y4K3 522 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 CROCCQ5TZA2 2017 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 NOS1APO75052 506 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-201ENST00000302516 LPOP22079 712 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-201ENST00000302516 FMO1Q01740 532 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 CCNYL2Q5T2Q4 361 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 LNX1Q8TBB1 728 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-201ENST00000302516 TOP1MTQ969P6 601 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 ERMAPQ96PL5 475 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-201ENST00000302516 PDCD2LQ9BRP1 358 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 TOR4AQ9NXH8 423 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 KLRC4O43908 158 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 CALCAP01258 141 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 GSTT2BP0CG30 244 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 INSRRP14616 1297 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 SMARCB1Q12824 385 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 LMAN2LQ9H0V9 348 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 SNTG2Q9NY99 539 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 SPATA31A5Q5VU36 1347 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 SPATA31A7Q8IWB4 1347 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 SLC30A4O14863 429 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 TCEA3O75764 348 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 SLC18A1P54219 525 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 LIPEQ05469 1076 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 SCAIQ8N9R8 606 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 SNIP1Q8TAD8 396 aaKnown RBP7.64□□□□□ -1.19
SF3B3-201ENST00000302516 SPATA20Q8TB22 786 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 YTHDF1Q9BYJ9 559 aaKnown RBP7.64□□□□□ -1.19
SF3B3-201ENST00000302516 CEP41Q9BYV8 373 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 TAS2R7Q9NYW3 318 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 PCDHB1Q9Y5F3 818 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 NID2Q14112 1375 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 A0A0J9YYE9 177 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 OR14I1A6ND48 311 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms