RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 LOC100506127A0A0U1RQW1 187 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 TRAFD1O14545 582 aaPredicted RBP13.32□□□□□ -0.28
CASC4-201ENST00000299957 KLF11O14901 512 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 DEAF1O75398 565 aaPredicted RBP13.32□□□□□ -0.28
CASC4-201ENST00000299957 KCNH1O95259 989 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 HLA-DQB2P05538 268 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 TPP2P29144 1249 aaPredicted RBP13.32□□□□□ -0.28
CASC4-201ENST00000299957 HALP42357 657 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 RGS4P49798 205 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 NAB1Q13506 487 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 CCL14Q16627 93 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 CTC1Q2NKJ3 1217 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 PATL1Q86TB9 770 aaKnown RBP13.32□□□□□ -0.28
CASC4-201ENST00000299957 DENND1CQ8IV53 801 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 ADCY4Q8NFM4 1077 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 HMCESQ96FZ2 354 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 GPR21Q99679 349 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 CLK4Q9HAZ1 481 aaKnown RBP13.32□□□□□ -0.28
CASC4-201ENST00000299957 SPON1Q9HCB6 807 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 RASSF1Q9NS23 344 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.32□□□□□ -0.28
CASC4-201ENST00000299957 BTBD19C9JJ37 291 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 NUP107P57740 925 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 SPIDRQ14159 915 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 MFSD14CQ5VZR4 134 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 TAF2Q6P1X5 1199 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 TAGAPQ8N103 731 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 STN1Q9H668 368 aaKnown RBP13.32□□□□□ -0.28
CASC4-201ENST00000299957 ATXN10Q9UBB4 475 aa13.32□□□□□ -0.28
CASC4-201ENST00000299957 N4BP2Q86UW6 1770 aaPredicted RBP13.31□□□□□ -0.28
CASC4-201ENST00000299957 EVPLLA8MZ36 301 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 NOBOXO60393 691 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 CKMP06732 381 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 CCT8P50990 548 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 CASP9P55211 416 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 LAPTM4AQ15012 233 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 TCEA2Q15560 299 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 DUSP28Q4G0W2 176 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 FAM98BQ52LJ0 330 aaKnown RBP13.31□□□□□ -0.28
CASC4-201ENST00000299957 EPGNQ6UW88 154 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 ZNF621Q6ZSS3 439 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 TPGS1Q6ZTW0 290 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 TMIGD2Q96BF3 282 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 TSSK3Q96PN8 268 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 C9orf16Q9BUW7 83 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 MRPS26Q9BYN8 205 aaKnown RBP13.31□□□□□ -0.28
CASC4-201ENST00000299957 TRIM54Q9BYV2 358 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 POLR1EQ9GZS1 481 aaKnown RBP13.31□□□□□ -0.28
CASC4-201ENST00000299957 C6orf62Q9GZU0 229 aaPredicted RBP13.31□□□□□ -0.28
CASC4-201ENST00000299957 ABCC13Q9NSE7 274 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 CHCHD3Q9NX63 227 aaKnown RBP13.31□□□□□ -0.28
CASC4-201ENST00000299957 FBXW11Q9UKB1 542 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 BLOC1S6Q9UL45 172 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 ABLIM1O14639 778 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 MAGEB3O15480 346 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 TLR5O60602 858 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 SOAT1P35610 550 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 MAPRE1Q15691 268 aaKnown RBP13.31□□□□□ -0.28
CASC4-201ENST00000299957 ZNF789Q5FWF6 425 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 METTL21CQ5VZV1 264 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 CDCA2Q69YH5 1023 aaPredicted RBP13.31□□□□□ -0.28
CASC4-201ENST00000299957 MTMR14Q8NCE2 650 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 STAG3L4Q8TBR4 150 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 SERPINB11Q96P15 392 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 HNRNPABQ99729 332 aaKnown RBP13.31□□□□□ -0.28
CASC4-201ENST00000299957 AMBNQ9NP70 447 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 TMEM161AQ9NX61 479 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 MOCS1Q9NZB8 636 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 GMIPQ9P107 970 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 PCDHGB4Q9UN71 923 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 INVSQ9Y283 1065 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 A0A087X1B8 175 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 ATG7O95352 703 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 CLDN10P78369 228 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 CDK18Q07002 472 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 LPIN1Q14693 890 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 POTEHQ6S545 545 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 LINGO1Q96FE5 620 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 FBXL20Q96IG2 436 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 NSUN5Q96P11 429 aaKnown RBP13.31□□□□□ -0.28
CASC4-201ENST00000299957 TMEM209Q96SK2 561 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 ELOVL6Q9H5J4 265 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 CXorf21Q9HAI6 301 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 SH3BP4Q9P0V3 963 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 EIF3LQ9Y262 564 aaKnown RBP13.31□□□□□ -0.28
CASC4-201ENST00000299957 TCAF1Q9Y4C2 921 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 TOGARAM1Q9Y4F4 1720 aa13.31□□□□□ -0.28
CASC4-201ENST00000299957 MATN2O00339 956 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 IGFBP6P24592 240 aaPredicted RBP13.3□□□□□ -0.28
CASC4-201ENST00000299957 IDH2P48735 452 aaKnown RBP13.3□□□□□ -0.28
CASC4-201ENST00000299957 RAD23AP54725 363 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 MRPS15P82914 257 aaKnown RBP13.3□□□□□ -0.28
CASC4-201ENST00000299957 ARMC12Q5T9G4 340 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 DEFB128Q7Z7B8 93 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 ZCCHC7Q8N3Z6 543 aaKnown RBP13.3□□□□□ -0.28
CASC4-201ENST00000299957 SPPL2AQ8TCT8 520 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 SMOQ99835 787 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 PNPLA3Q9NST1 481 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 CNTN6Q9UQ52 1028 aa13.3□□□□□ -0.28
CASC4-201ENST00000299957 POLR3HQ9Y535 204 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms