RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 UNC93AQ86WB7 457 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TBC1D3Q8IZP1 549 aaPredicted RBP13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 DAW1Q8N136 415 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PPP3R2Q96LZ3 170 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 FCRL4Q96PJ5 515 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 NOL11Q9H8H0 719 aaKnown RBP13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ZNF490Q9ULM2 529 aaPredicted RBP13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SALL3Q9BXA9 1300 aa13.59□□□□□ -0.23
CHRFAM7A-201ENST00000299847 AZIN1O14977 448 aa13.58□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TLR5O60602 858 aa13.58□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TMCC2O75069 709 aa13.58□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ICAM3P32942 547 aa13.58□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ABATP80404 500 aa13.58□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TCEAL5Q5H9L2 206 aa13.58□□□□□ -0.23
CHRFAM7A-201ENST00000299847 LDLRAP1Q5SW96 308 aa13.58□□□□□ -0.23
CHRFAM7A-201ENST00000299847 VWA5B1Q5TIE3 1220 aa13.58□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.58□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ZNF563Q8TA94 476 aa13.58□□□□□ -0.23
CHRFAM7A-201ENST00000299847 UROC1Q96N76 676 aa13.58□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TRNT1Q96Q11 434 aaKnown RBP13.58□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ABCB9Q9NP78 766 aa13.58□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ARL8BQ9NVJ2 186 aa13.58□□□□□ -0.23
CHRFAM7A-201ENST00000299847 GULP1Q9UBP9 304 aa13.58□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RBM7Q9Y580 266 aaKnown RBP13.58□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TIMM22Q9Y584 194 aa13.58□□□□□ -0.23
CHRFAM7A-201ENST00000299847 GPC6Q9Y625 555 aaPredicted RBP13.58□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PSMD4P55036 377 aaKnown RBP13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CARTPTQ16568 116 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PPM1JQ5JR12 505 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 LRRC55Q6ZSA7 311 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PEG10Q86TG7 708 aaKnown RBP13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 FAR1Q8WVX9 515 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 MCRS1Q96EZ8 462 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CFAP97Q9P2B7 532 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CCDC189A1A4V9 331 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 DRD4P21917 467 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PSMD8P48556 350 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 MANFP55145 182 aaKnown RBP13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CXorf57Q6NSI4 855 aaKnown RBP13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 DLG3Q92796 817 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 LENG1Q96BZ8 264 aaPredicted RBP13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 KCTD15Q96SI1 283 aaPredicted RBP13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 BHLHE41Q9C0J9 482 aaPredicted RBP13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PSME2Q9UL46 239 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 COL5A2P05997 1499 aaPredicted RBP13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 OTCP00480 354 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 EFNA1P20827 205 aaPredicted RBP13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 LPOP22079 712 aaPredicted RBP13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 NDUFA5Q16718 116 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 USP41Q3LFD5 358 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 KRT74Q7RTS7 529 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 FAM35AQ86V20 835 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CERS5Q8N5B7 392 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ATL1Q8WXF7 558 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 MYDGFQ969H8 173 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ITCHQ96J02 903 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CHID1Q9BWS9 393 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 GMIPQ9P107 970 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ADGRE2Q9UHX3 823 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ADAM28Q9UKQ2 775 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 A0A1W2PQ67 120 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 AHCYL1O43865 530 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 C9P02748 559 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SLC35G4P0C7Q5 338 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SLC7A2P52569 658 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CLEC6AQ6EIG7 209 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PSRC1Q6PGN9 363 aaPredicted RBP13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 VSIG10LQ86VR7 867 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 LEMD2Q8NC56 503 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PPCDCQ96CD2 204 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ZHX1-C8orf76Q96EF9 292 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 P2RY11Q96G91 374 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ART5Q96L15 291 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TSSK3Q96PN8 268 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 LRMDAQ9H2I8 198 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ERGIC3Q9Y282 383 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 RAP2CQ9Y3L5 183 aa13.58□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ENPP3O14638 875 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CXCR3P49682 368 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 MTA1Q13330 715 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TIGD2Q4W5G0 525 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 RNF19BQ6ZMZ0 732 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SH3RF1Q7Z6J0 888 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 FIBCD1Q8N539 461 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ZFP28Q8NHY6 868 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 MYO19Q96H55 970 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PCDHB18PQ96TA0 734 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 WRAP53Q9BUR4 548 aaKnown RBP13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 BRINP2Q9C0B6 783 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 INTS7Q9NVH2 962 aaKnown RBP13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 AKAP7Q9P0M2 348 aaPredicted RBP13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 DHRS12A0PJE2 317 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TFECO14948 347 aaPredicted RBP13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TLL1O43897 1013 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TPST2O60704 377 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ELNP15502 786 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 YAP1P46937 504 aaKnown RBP13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 NDUFV1P49821 464 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TOP3AQ13472 1001 aaPredicted RBP13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CBX2Q14781 532 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms