RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 EGFRP00533 1210 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 BDNFP23560 247 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 DCKP27707 260 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 CXCL9Q07325 125 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 TIGD2Q4W5G0 525 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 INTS11Q5TA45 600 aaKnown RBP11.42□□□□□ -0.58
TRUB1-201ENST00000298746 PRMT9Q6P2P2 845 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 HFE2Q6ZVN8 426 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 DNERQ8NFT8 737 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 SNX19Q92543 992 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 NCLNQ969V3 563 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 TNIP3Q96KP6 325 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 C1QTNF1Q9BXJ1 281 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 LHPPQ9H008 270 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 EXD2Q9NVH0 621 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 OR12D3Q9UGF7 316 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 AAR2Q9Y312 384 aaKnown RBP11.42□□□□□ -0.58
TRUB1-201ENST00000298746 TMED5Q9Y3A6 229 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 EVPLQ92817 2033 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 A0A087X1B8 175 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 PIP5K1BO14986 540 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 TPD52L2O43399 206 aaKnown RBP11.42□□□□□ -0.58
TRUB1-201ENST00000298746 MYO1DO94832 1006 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 KRT75O95678 551 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 CHRNB3Q05901 458 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 IQSEC1Q6DN90 963 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 SLC22A9Q8IVM8 553 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 PTGR2Q8N8N7 351 aaPredicted RBP11.42□□□□□ -0.58
TRUB1-201ENST00000298746 REPS2Q8NFH8 660 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 ABHD11Q8NFV4 315 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 FBXO30Q8TB52 745 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 ROPN1LQ96C74 230 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 LRRC58Q96CX6 371 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 SEMA4BQ9NPR2 832 aaPredicted RBP11.42□□□□□ -0.58
TRUB1-201ENST00000298746 ARMC1Q9NVT9 282 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 TIMM22Q9Y584 194 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 UBA6A0AVT1 1052 aaPredicted RBP11.42□□□□□ -0.58
TRUB1-201ENST00000298746 NCAM2O15394 837 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 CD68P34810 354 aaPredicted RBP11.42□□□□□ -0.58
TRUB1-201ENST00000298746 GSK3BP49841 420 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 TNK2Q07912 1038 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 INAQ16352 499 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 NOMO2Q5JPE7 1267 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 BTBD8Q5XKL5 378 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 FAM45BPQ6NSW5 357 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 R3HCC1LQ7Z5L2 792 aaKnown RBP11.42□□□□□ -0.58
TRUB1-201ENST00000298746 ZDHHC13Q8IUH4 622 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 TBC1D21Q8IYX1 336 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 CLYBLQ8N0X4 340 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 MFSD2AQ8NA29 543 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 FAM45AQ8TCE6 357 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 PABPC5Q96DU9 382 aaKnown RBP11.42□□□□□ -0.58
TRUB1-201ENST00000298746 TSPAN17Q96FV3 270 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 KCNA7Q96RP8 456 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 SEZ6LQ9BYH1 1024 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 ADAMTS10Q9H324 1103 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 ZNF385DQ9H6B1 395 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 AGPAT4Q9NRZ5 378 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 ACTR3BQ9P1U1 418 aa11.42□□□□□ -0.58
TRUB1-201ENST00000298746 RCOR3Q9P2K3 495 aaPredicted RBP11.42□□□□□ -0.58
TRUB1-201ENST00000298746 FAM32AQ9Y421 112 aaKnown RBP11.42□□□□□ -0.58
TRUB1-201ENST00000298746 MAGED1Q9Y5V3 778 aaPredicted RBP11.42□□□□□ -0.58
TRUB1-201ENST00000298746 NOBOXO60393 691 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 RASAL1O95294 804 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 ARIH2O95376 493 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 LBPP18428 481 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 PSMB9P28065 219 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 TRPC1P48995 793 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 SEPHS1P49903 392 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 FBXO47Q5MNV8 452 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 ZNF773Q6PK81 442 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 RNF19BQ6ZMZ0 732 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 HEATR4Q86WZ0 1026 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 DCBLD1Q8N8Z6 715 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 FIG4Q92562 907 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 MAGED4Q96JG8 741 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 C3orf30Q96M34 536 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 ULBP1Q9BZM6 244 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 TKTL2Q9H0I9 626 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 GOLGA2P5Q9HBQ8 144 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 PALMDQ9NP74 551 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 RBM22Q9NW64 420 aaKnown RBP eCLIP11.41□□□□□ -0.58
TRUB1-201ENST00000298746 TMEM9Q9P0T7 183 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 CD300AQ9UGN4 299 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 PNMA8BQ9ULN7 279 aaPredicted RBP11.41□□□□□ -0.58
TRUB1-201ENST00000298746 ORC6Q9Y5N6 252 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 PTPRFP10586 1907 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 CCDC154A6NI56 674 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 SUPT3HB4E1H0 165 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 ANXA9O76027 345 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 GPIP06744 558 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 CAPN3P20807 821 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 ICAM3P32942 547 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 SERPINB10P48595 397 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 HLCSP50747 726 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 GRB7Q14451 532 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 PSMD5Q16401 504 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 TSTD2Q5T7W7 516 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 SPESP1Q6UW49 350 aa11.41□□□□□ -0.58
TRUB1-201ENST00000298746 BTLAQ7Z6A9 289 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms