RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 CCDC167Q9P0B6 97 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 MID2Q9UJV3 735 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 ANKRD36A6QL64 1941 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 CHD5Q8TDI0 1954 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 KIF3CO14782 793 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 STC2O76061 302 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 GLP2RO95838 553 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 SH3BP2P78314 561 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 UNC50Q53HI1 259 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 METTL21CQ5VZV1 264 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 KIAA0408Q6ZU52 694 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 DCBLD1Q8N8Z6 715 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 LPCAT1Q8NF37 534 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 CDKN2AIPNLQ96HQ2 116 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 SPATA17Q96L03 361 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 SLC39A3Q9BRY0 314 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.78□□□□□ -0.52
RHO-201ENST00000296271 ZBTB26Q9HCK0 441 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 OLA1Q9NTK5 396 aaKnown RBP11.78□□□□□ -0.52
RHO-201ENST00000296271 DNMT3LQ9UJW3 386 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 IQCF5A8MTL0 148 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 NRG2O14511 850 aaPredicted RBP11.78□□□□□ -0.52
RHO-201ENST00000296271 CD160O95971 181 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 SERPINF2P08697 491 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 LINGO3P0C6S8 592 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 ZCCHC18P0CG32 403 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 THRAP10827 490 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 CD1DP15813 335 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 MZF1P28698 734 aaPredicted RBP11.78□□□□□ -0.52
RHO-201ENST00000296271 MRPS22P82650 360 aaKnown RBP11.78□□□□□ -0.52
RHO-201ENST00000296271 SEMG2Q02383 582 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 CYTH1Q15438 398 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 PFKFB4Q16877 469 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 PITRM1Q5JRX3 1037 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 PSAPL1Q6NUJ1 521 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 PAQR3Q6TCH7 311 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 PIWIL4Q7Z3Z4 852 aaKnown RBP11.78□□□□□ -0.52
RHO-201ENST00000296271 KYQ8NBH2 561 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 OR4L1Q8NH43 312 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 WFDC5Q8TCV5 224 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 CALML6Q8TD86 181 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 TRIM8Q9BZR9 551 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 YY1AP1Q9H869 796 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 TRPC7Q9HCX4 862 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 TLR9Q9NR96 1032 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 DLGAP2Q9P1A6 1054 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 ANGPTL2Q9UKU9 493 aa11.78□□□□□ -0.52
RHO-201ENST00000296271 K7ERQ8 282 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 NPHS1O60500 1241 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 PAPSS2O95340 614 aaPredicted RBP11.77□□□□□ -0.52
RHO-201ENST00000296271 MTHFD2P13995 350 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 CA5AP35218 305 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 AQP4P55087 323 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 RING1Q06587 406 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 RALGDSQ12967 914 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 DEFB115Q30KQ5 88 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 ZNF678Q5SXM1 525 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 ATXN7L2Q5T6C5 722 aaPredicted RBP11.77□□□□□ -0.52
RHO-201ENST00000296271 RNF219Q5W0B1 726 aaPredicted RBP11.77□□□□□ -0.52
RHO-201ENST00000296271 ANKS3Q6ZW76 656 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 DHDDSQ86SQ9 333 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 PTGR2Q8N8N7 351 aaPredicted RBP11.77□□□□□ -0.52
RHO-201ENST00000296271 PPFIBP2Q8ND30 876 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 LRCH3Q96II8 777 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 CNDP1Q96KN2 507 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 ECSITQ9BQ95 431 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 PCDHAC1Q9H158 963 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 WDR41Q9HAD4 459 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 CATSPERZQ9NTU4 200 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 AGO1Q9UL18 857 aaKnown RBP11.77□□□□□ -0.52
RHO-201ENST00000296271 PHF24Q9UPV7 400 aa11.77□□□□□ -0.52
RHO-201ENST00000296271 CDC7O00311 574 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 FBP2O00757 339 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 INSIG1O15503 277 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 RPP40O75818 363 aaKnown RBP11.77□□□□□ -0.53
RHO-201ENST00000296271 FDXRP22570 491 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 PMLP29590 882 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 PRDX3P30048 256 aaKnown RBP11.77□□□□□ -0.53
RHO-201ENST00000296271 GKP32189 559 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 YBEYP58557 167 aaPredicted RBP11.77□□□□□ -0.53
RHO-201ENST00000296271 DNAJB13P59910 316 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 ACAP2Q15057 778 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 SLC14A2Q15849 920 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 ZNF423Q2M1K9 1284 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 SCIMPQ6UWF3 145 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 PELI3Q8N2H9 469 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 CPSF7Q8N684 471 aaKnown RBP11.77□□□□□ -0.53
RHO-201ENST00000296271 BRSK1Q8TDC3 778 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 GDPD5Q8WTR4 605 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 SEPT8Q92599 483 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 SPDL1Q96EA4 605 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 FEM1CQ96JP0 617 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 MAELQ96JY0 434 aaKnown RBP11.77□□□□□ -0.53
RHO-201ENST00000296271 DEFB118Q96PH6 123 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 CINPQ9BW66 212 aaPredicted RBP11.77□□□□□ -0.53
RHO-201ENST00000296271 GPBP1L1Q9HC44 474 aaPredicted RBP11.77□□□□□ -0.53
RHO-201ENST00000296271 PLK2Q9NYY3 685 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 FNIP2Q9P278 1114 aa11.77□□□□□ -0.53
RHO-201ENST00000296271 UBA2Q9UBT2 640 aaPredicted RBP11.77□□□□□ -0.53
RHO-201ENST00000296271 PCDHGB4Q9UN71 923 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms