RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 RMDN1Q96DB5 314 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 L3HYPDHQ96EM0 354 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 CDKN2AIPNLQ96HQ2 116 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 EXOC2Q96KP1 924 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 NSMCE3Q96MG7 304 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 POPDC3Q9HBV1 291 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 NLE1Q9NVX2 485 aaPredicted RBP20■□□□□ 0.79
CXCL16-201ENST00000293778 STK39Q9UEW8 545 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 SPO11Q9Y5K1 396 aa20■□□□□ 0.79
CXCL16-201ENST00000293778 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.99■□□□□ 0.79
CXCL16-201ENST00000293778 ILVBLA1L0T0 632 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 SMIM24O75264 130 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 STC2O76061 302 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 SEC24AO95486 1093 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 HMGA1P17096 107 aaKnown RBP19.99■□□□□ 0.79
CXCL16-201ENST00000293778 DSG1Q02413 1049 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 ZNF177Q13360 481 aaPredicted RBP19.99■□□□□ 0.79
CXCL16-201ENST00000293778 RFTN1Q14699 578 aaPredicted RBP19.99■□□□□ 0.79
CXCL16-201ENST00000293778 ZNF678Q5SXM1 525 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 RYBPQ8N488 228 aaPredicted RBP19.99■□□□□ 0.79
CXCL16-201ENST00000293778 MIEF2Q96C03 454 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 CDRT15Q96T59 188 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 EFCAB1Q9HAE3 211 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 GKN1Q9NS71 199 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 TRPM5Q9NZQ8 1165 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 PACSIN3Q9UKS6 424 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 INSIG1O15503 277 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 PQBP1O60828 265 aaKnown RBP19.99■□□□□ 0.79
CXCL16-201ENST00000293778 SUPT7LO94864 414 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 EFEMP2O95967 443 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 SUOXP51687 545 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 SGSHP51688 502 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 ZNF140P52738 457 aaPredicted RBP19.99■□□□□ 0.79
CXCL16-201ENST00000293778 C1QTNF8P60827 252 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 NFKB2Q00653 900 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 TYSND1Q2T9J0 566 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 KIAA1841Q6NSI8 718 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 CHSY3Q70JA7 882 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 PGAM4Q8N0Y7 254 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 ECSITQ9BQ95 431 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 AARSD1Q9BTE6 412 aaKnown RBP19.99■□□□□ 0.79
CXCL16-201ENST00000293778 VN1R3Q9BXE9 311 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 SCUBE2Q9NQ36 999 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 AFF4Q9UHB7 1163 aaKnown RBP19.99■□□□□ 0.79
CXCL16-201ENST00000293778 TRAF6Q9Y4K3 522 aa19.99■□□□□ 0.79
CXCL16-201ENST00000293778 UPP2O95045 317 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 ENO3P13929 434 aaPredicted RBP19.98■□□□□ 0.79
CXCL16-201ENST00000293778 ZNF37AP17032 561 aaPredicted RBP19.98■□□□□ 0.79
CXCL16-201ENST00000293778 CR2P20023 1033 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 ART3Q13508 389 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 RNF111Q6ZNA4 994 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 CHST9Q7L1S5 443 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 KBTBD6Q86V97 674 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 EXT2Q93063 718 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 WDR41Q9HAD4 459 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 GPBP1L1Q9HC44 474 aaPredicted RBP19.98■□□□□ 0.79
CXCL16-201ENST00000293778 MRGBPQ9NV56 204 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 INTS10Q9NVR2 710 aaKnown RBP19.98■□□□□ 0.79
CXCL16-201ENST00000293778 VPS28Q9UK41 221 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 ARIH1Q9Y4X5 557 aaPredicted RBP19.98■□□□□ 0.79
CXCL16-201ENST00000293778 A0A1B0GVM2 712 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 TCAF2A6NFQ2 919 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 CBX4O00257 560 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 UBFD1O14562 309 aaKnown RBP19.98■□□□□ 0.79
CXCL16-201ENST00000293778 CFLARO15519 480 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 TSPAN3O60637 253 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 PRSS56P0CW18 603 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 IRF1P10914 325 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 INHBCP55103 352 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 CCL23P55773 120 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 HERVK_113P63132 956 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 PDAP1Q13442 181 aaKnown RBP19.98■□□□□ 0.79
CXCL16-201ENST00000293778 UNC50Q53HI1 259 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 GLT6D1Q7Z4J2 308 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 ERVK-6Q9BXR3 956 aa19.98■□□□□ 0.79
CXCL16-201ENST00000293778 POLR3BQ9NW08 1133 aaPredicted RBP19.98■□□□□ 0.79
CXCL16-201ENST00000293778 AGO1Q9UL18 857 aaKnown RBP19.98■□□□□ 0.79
CXCL16-201ENST00000293778 HSPA1AP0DMV8 641 aaKnown RBP19.97■□□□□ 0.79
CXCL16-201ENST00000293778 HSPA1BP0DMV9 641 aaKnown RBP19.97■□□□□ 0.79
CXCL16-201ENST00000293778 TSPAN8P19075 237 aa19.97■□□□□ 0.79
CXCL16-201ENST00000293778 THOP1P52888 689 aa19.97■□□□□ 0.79
CXCL16-201ENST00000293778 SCN5AQ14524 2016 aa19.97■□□□□ 0.79
CXCL16-201ENST00000293778 CYTH1Q15438 398 aa19.97■□□□□ 0.79
CXCL16-201ENST00000293778 TAF1AQ15573 450 aaPredicted RBP19.97■□□□□ 0.79
CXCL16-201ENST00000293778 ADGRF1Q5T601 910 aa19.97■□□□□ 0.79
CXCL16-201ENST00000293778 OR4K2Q8NGD2 314 aa19.97■□□□□ 0.79
CXCL16-201ENST00000293778 UCMAQ8WVF2 138 aa19.97■□□□□ 0.79
CXCL16-201ENST00000293778 CLSTN3Q9BQT9 956 aa19.97■□□□□ 0.79
CXCL16-201ENST00000293778 TDRD1Q9BXT4 1180 aaKnown RBP19.97■□□□□ 0.79
CXCL16-201ENST00000293778 UBA6A0AVT1 1052 aaPredicted RBP19.96■□□□□ 0.79
CXCL16-201ENST00000293778 KIF3CO14782 793 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 UBDO15205 165 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 RAG1P15918 1043 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 CDC16Q13042 620 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 SQLEQ14534 574 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 PIGGQ5H8A4 983 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 AFTPHQ6ULP2 937 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 GK5Q6ZS86 529 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 IGSF21Q96ID5 467 aa19.96■□□□□ 0.79
CXCL16-201ENST00000293778 NPAS2Q99743 824 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms