RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 TAB1Q15750 504 aa11.4□□□□□ -0.59
NPC1L1-201ENST00000289547 BRMS1LQ5PSV4 323 aa11.4□□□□□ -0.59
NPC1L1-201ENST00000289547 KIAA1324Q6UXG2 1013 aaKnown RBP11.4□□□□□ -0.59
NPC1L1-201ENST00000289547 NEK10Q6ZWH5 1172 aa11.4□□□□□ -0.59
NPC1L1-201ENST00000289547 MCFD2Q8NI22 146 aa11.4□□□□□ -0.59
NPC1L1-201ENST00000289547 IGSF21Q96ID5 467 aa11.4□□□□□ -0.59
NPC1L1-201ENST00000289547 UGT2B28Q9BY64 529 aa11.4□□□□□ -0.59
NPC1L1-201ENST00000289547 TTYH3Q9C0H2 523 aa11.4□□□□□ -0.59
NPC1L1-201ENST00000289547 ARMC7Q9H6L4 198 aa11.4□□□□□ -0.59
NPC1L1-201ENST00000289547 UBA2Q9UBT2 640 aaPredicted RBP11.4□□□□□ -0.59
NPC1L1-201ENST00000289547 STXBP5LQ9Y2K9 1186 aa11.4□□□□□ -0.59
NPC1L1-201ENST00000289547 NCF1BA6NI72 391 aaPredicted RBP11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 NCF1CA8MVU1 366 aaPredicted RBP11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 ZNF623O75123 536 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 CILPO75339 1184 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 NCF1P14598 390 aaPredicted RBP11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 MARSP56192 900 aaKnown RBP11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 KLF10Q13118 480 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 CRTC3Q6UUV7 619 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 ZNF572Q7Z3I7 529 aaPredicted RBP11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 C11orf74Q86VG3 221 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 OOSP2Q86WS3 158 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 ZNF276Q8N554 614 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 NARS2Q96I59 477 aaKnown RBP11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 DUS2Q9NX74 493 aaKnown RBP11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 ZNF221Q9UK13 617 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 VANGL2Q9ULK5 521 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 WBP11Q9Y2W2 641 aaKnown RBP11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 DHRS12A0PJE2 317 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 CLDN25C9JDP6 229 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 CLDN5O00501 218 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 HIST1H2AGP0C0S8 130 aaPredicted RBP11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 HIST1H2ADP20671 130 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 KRT20P35900 424 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 SNRPD1P62314 119 aaKnown RBP11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 PFKPQ01813 784 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 EPS8Q12929 822 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 C1DQ13901 141 aaKnown RBP11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 PPP1R26Q5T8A7 1209 aaPredicted RBP11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 LRRC57Q8N9N7 239 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 HIST1H2AHQ96KK5 128 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 QKIQ96PU8 341 aaKnown RBP eCLIP11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 CDCA3Q99618 268 aaPredicted RBP11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 HIST1H2AJQ99878 128 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 H2AFJQ9BTM1 129 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 KRT84Q9NSB2 600 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 GMEB1Q9Y692 573 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 IGKV6D-21A0A0A0MT36 114 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 TCRBV9S1A1TA0A576 114 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 APOC4-APOC2K7ER74 178 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 CCNT2O60583 730 aaKnown RBP11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 APOC2P02655 101 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 CYP1A2P05177 515 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 SNRPB2P08579 225 aaKnown RBP11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 SERPINF2P08697 491 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 CHRM3P20309 590 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 CYP2F1P24903 491 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 BMPR1AP36894 532 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 ACTR3P61158 418 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 CACHD1Q5VU97 1274 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 TFAP2DQ7Z6R9 452 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 KRT73Q86Y46 540 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 TTC30BQ8N4P2 665 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 NECTIN4Q96NY8 510 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 GINS4Q9BRT9 223 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 KIAA1522Q9P206 1035 aaPredicted RBP11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 NUDT5Q9UKK9 219 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 RNF112Q9ULX5 631 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 SBF2Q86WG5 1849 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 LAMB2P55268 1798 aa11.39□□□□□ -0.59
NPC1L1-201ENST00000289547 SLC38A8A6NNN8 435 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 BIRC5O15392 142 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 TGDSO95455 350 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 CALCAP01258 141 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 RPL17P18621 184 aaKnown RBP11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 RBL1P28749 1068 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 AIF1P55008 147 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 WDR4P57081 412 aaKnown RBP11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 GRSF1Q12849 480 aaKnown RBP eCLIP11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 DPYSQ14117 519 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 EML3Q32P44 896 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 RALGPS1Q5JS13 557 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 TYW3Q6IPR3 259 aaKnown RBP11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 DNAJC14Q6Y2X3 702 aaPredicted RBP11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 FAM126BQ8IXS8 530 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 FAM71AQ8IYT1 594 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 ADAM32Q8TC27 787 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 SHC3Q92529 594 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 RTKNQ9BST9 563 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 UBP1Q9NZI7 540 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 SLC7A8Q9UHI5 535 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 CCDC189A1A4V9 331 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 CCDC182A6NF36 153 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 INPPL1O15357 1258 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 ADAMTS4O75173 837 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 FBXL19Q6PCT2 694 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 SPESP1Q6UW49 350 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 LCLAT1Q6UWP7 414 aa11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 APTXQ7Z2E3 356 aaKnown RBP11.38□□□□□ -0.59
NPC1L1-201ENST00000289547 CHPFQ8IZ52 775 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms