RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 GALNT4Q8N4A0 578 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 GFM2Q969S9 779 aaKnown RBP18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 VPS39Q96JC1 886 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 KLHL32Q96NJ5 620 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 CRISPLD2Q9H0B8 497 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 TASP1Q9H6P5 420 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 GKN1Q9NS71 199 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 ACTL7AQ9Y615 435 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 CDH23Q9H251 3354 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 IGLV3-10A0A075B6K4 115 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 TRIM38O00635 465 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 SLC6A4P31645 630 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 ITKQ08881 620 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 LRRC26Q2I0M4 334 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 ISLR2Q6UXK2 745 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 KCNMB4Q86W47 210 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 CHERPQ8IWX8 916 aaKnown RBP18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 ACVR1CQ8NER5 493 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 TOP1MTQ969P6 601 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 NACA2Q9H009 215 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 MRPL40Q9NQ50 206 aaKnown RBP18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 C20orf96Q9NUD7 363 aaPredicted RBP18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 TLK1Q9UKI8 766 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 G3BP2Q9UN86 482 aaKnown RBP18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 CEPT1Q9Y6K0 416 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 AK5Q9Y6K8 562 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 MYLKQ15746 1914 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 TRMUO75648 421 aaKnown RBP18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 ZNF26P17031 533 aaPredicted RBP18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 MSX2P35548 267 aaPredicted RBP18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 SMARCB1Q12824 385 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 TMEM151AQ8N4L1 468 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 PAWRQ96IZ0 340 aaKnown RBP18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 MRGPRX2Q96LB1 330 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 PPP1R36Q96LQ0 422 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 C1QTNF1Q9BXJ1 281 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 IARS2Q9NSE4 1012 aaKnown RBP18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 CHCHD3Q9NX63 227 aaKnown RBP18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 UTP6Q9NYH9 597 aaKnown RBP18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 ZDHHC2Q9UIJ5 367 aa18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 AAR2Q9Y312 384 aaKnown RBP18.36■□□□□ 0.53
PDLIM3-201ENST00000284767 TK2O00142 265 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 VAPBO95292 243 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 HMGA1P17096 107 aaKnown RBP18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 CDH2P19022 906 aaPredicted RBP18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 DNAJB1P25685 340 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 SLC5A2P31639 672 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 DCTN2Q13561 401 aaKnown RBP18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 TIGD7Q6NT04 549 aaPredicted RBP18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 LGI2Q8N0V4 545 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 OR52K2Q8NGK3 314 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 C2orf15Q8WU43 125 aaKnown RBP18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 WBP2Q969T9 261 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 ASB9Q96DX5 294 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 GPR22Q99680 433 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 TTLL2Q9BWV7 592 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 NSMCE4AQ9NXX6 385 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 SLC2A6Q9UGQ3 507 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 COCHO43405 550 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 RNASEH2AO75792 299 aaKnown RBP18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 CLTBP09497 229 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 ZNF23P17027 643 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 OR1E1P30953 314 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 PSMD8P48556 350 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 NPY2RP49146 381 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 TXNL4AP83876 142 aaKnown RBP18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 NXNQ6DKJ4 435 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 RNF148Q8N7C7 305 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 GAB3Q8WWW8 586 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 EME1Q96AY2 570 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 ZNF597Q96LX8 424 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 SP110Q9HB58 689 aa18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 SUCOQ9UBS9 1254 aaKnown RBP18.35■□□□□ 0.53
PDLIM3-201ENST00000284767 A0A0D9SEW6 157 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 ZNF840PA6NDX5 716 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 TCAF2A6NFQ2 919 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 PFDN1O60925 122 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 SBK3P0C264 359 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 HSPA1AP0DMV8 641 aaKnown RBP18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 HSPA1BP0DMV9 641 aaKnown RBP18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 TACR2P21452 398 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 ATP5C1P36542 298 aaKnown RBP18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 DSC2Q02487 901 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 PLD1Q13393 1074 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 PTK2BQ14289 1009 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 TMEM198Q66K66 360 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 DENND1CQ8IV53 801 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 SPNS2Q8IVW8 549 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 PNPLA1Q8N8W4 532 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 TSPAN14Q8NG11 270 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 ZNF461Q8TAF7 563 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 STYXQ8WUJ0 223 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 TMEM169Q96HH4 297 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 OSBPL11Q9BXB4 747 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 FSD1LQ9BXM9 530 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 RNF38Q9H0F5 515 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 MRGBPQ9NV56 204 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 SLC39A10Q9ULF5 831 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 BACE2Q9Y5Z0 518 aa18.34■□□□□ 0.53
PDLIM3-201ENST00000284767 COPG1Q9Y678 874 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms