RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 OTCP00480 354 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 IFNA21P01568 189 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 PDHBP11177 359 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 PITPNAQ00169 270 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 CREMQ03060 361 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 CBX2Q14781 532 aaPredicted RBP13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 Q4G0T1 1027 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 P4HA3Q7Z4N8 544 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 DNAAF1Q8NEP3 725 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 POC1BQ8TC44 478 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 SCGB3A2Q96PL1 93 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 OR52E6Q96RD3 313 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 AASSQ9UDR5 926 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 RIMKLBQ9ULI2 386 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 BAZ2BQ9UIF8 2168 aaKnown RBP13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 AXIN1O15169 862 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 RPL38P63173 70 aaKnown RBP13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 TMEM161BQ8NDZ6 487 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 ACTL9Q8TC94 416 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 DIRAS2Q96HU8 199 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 MROH8Q9H579 483 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 MRPL17Q9NRX2 175 aaKnown RBP13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 CYP11B2P19099 503 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 GSTT1P30711 240 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 SSR2P43308 183 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 CES3Q6UWW8 571 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 SGMS1Q86VZ5 419 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 MB21D2Q8IYB1 491 aaPredicted RBP13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 LRRC20Q8TCA0 184 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 HBS1LQ9Y450 684 aaKnown RBP13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 KANTRA0A1W2PQU2 76 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 RIPK2O43353 540 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 KDM4BO94953 1096 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 PTPRNQ16849 979 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 SSX6Q7RTT6 188 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 SDR16C5Q8N3Y7 309 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 ZSCAN4Q8NAM6 433 aaPredicted RBP13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 MAFIPQ8WZ33 124 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 HTRA1Q92743 480 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 NSMCE3Q96MG7 304 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 ATG10Q9H0Y0 220 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 PRAMEF33A0A0G2JMD5 474 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 CPSF4LA6NMK7 179 aaKnown RBP13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 GSG1L2A8MUP6 293 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 PRAMEF10O60809 474 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 SP100P23497 879 aaPredicted RBP13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 PTGS2P35354 604 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 ERVK-9P63128 1117 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 ZNF792Q3KQV3 632 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 SPIN3Q5JUX0 258 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 OVCA2Q8WZ82 227 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 RC3H2Q9HBD1 1191 aaKnown RBP13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 PIH1D1Q9NWS0 290 aaKnown RBP13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 ETAA1Q9NY74 926 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 WASF3Q9UPY6 502 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 ERVK-11Q9UQG0 969 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 AFF1P51825 1210 aaKnown RBP13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 ST3GAL4Q11206 333 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 SCGB2A2Q13296 93 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 CLCA4Q14CN2 919 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 CCDC107Q8WV48 283 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 GFM1Q96RP9 751 aaKnown RBP13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 MCMBPQ9BTE3 642 aa13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 CUEDC1Q9NWM3 386 aaPredicted RBP13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 IFT80Q9P2H3 777 aaPredicted RBP13.22□□□□□ -0.29
SMARCA5-201ENST00000283131 GZMAP12544 262 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 NR1H2P55055 460 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 ABHD5Q8WTS1 349 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 TP53INP1Q96A56 240 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 CEP295NLQ96MC4 621 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 MAU2Q9Y6X3 613 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 NT5EP21589 574 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 SLC1A2P43004 574 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 MLLT6P55198 1093 aaPredicted RBP13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 PRR23BQ6ZRT6 265 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 GPRIN3Q6ZVF9 776 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 OTUB2Q96DC9 234 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 ASAH2Q9NR71 780 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 MARCH2Q9P0N8 246 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 PCDHGA10Q9Y5H3 936 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 PAPSS2O95340 614 aaPredicted RBP13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 LINGO3P0C6S8 592 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 LHCGRP22888 699 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 TCEA1P23193 301 aaKnown RBP13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 ZNF155Q12901 538 aaPredicted RBP13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 OR4C6Q8NH72 309 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 CDHR2Q9BYE9 1310 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 ABCA10Q8WWZ4 1543 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 NKRFO15226 690 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 PEX11AO75192 247 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 CCNCP24863 283 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.291e-6■■■■□ 22.8
SMARCA5-201ENST00000283131 CDK16Q00536 496 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 ARFRP1Q13795 201 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 ISLR2Q6UXK2 745 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 BORCS8Q96FH0 119 aa13.21□□□□□ -0.29
SMARCA5-201ENST00000283131 PGLSO95336 258 aa13.21□□□□□ -0.3
SMARCA5-201ENST00000283131 NADKO95544 446 aaPredicted RBP13.21□□□□□ -0.3
SMARCA5-201ENST00000283131 HGFP14210 728 aa13.21□□□□□ -0.3
SMARCA5-201ENST00000283131 AP2S1P53680 142 aaPredicted RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms