RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 CMTR2Q8IYT2 770 aaKnown RBP11.38□□□□□ -0.59
SCLT1-201ENST00000281142 NAT16Q8N8M0 369 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 RDH11Q8TC12 318 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 PHF21BQ96EK2 531 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 STARD7Q9NQZ5 370 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 CHST12Q9NRB3 414 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 SARDHQ9UL12 918 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 KIAA1257Q9ULG3 409 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 V9GYQ6 96 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 ZFC3H1O60293 1989 aaKnown RBP11.38□□□□□ -0.59
SCLT1-201ENST00000281142 KIAA0100Q14667 2235 aaKnown RBP11.38□□□□□ -0.59
SCLT1-201ENST00000281142 FAM95CA0A1B0GW59 222 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 RRN3P2A6NIE6 340 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 EEF2KO00418 725 aaKnown RBP11.38□□□□□ -0.59
SCLT1-201ENST00000281142 EI24O14681 340 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 NRP2O60462 931 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 MATN1P21941 496 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 ADIGQ0VDE8 80 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 CSHL1Q14406 222 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 POU6F1Q14863 301 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 TMEM214Q6NUQ4 689 aaKnown RBP11.38□□□□□ -0.59
SCLT1-201ENST00000281142 BTLAQ7Z6A9 289 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 SLC7A5P1Q8MH63 180 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 DDHD1Q8NEL9 900 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 SPATA22Q8NHS9 363 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 SGCDQ92629 289 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 C3orf30Q96M34 536 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 PIGVQ9NUD9 493 aa11.38□□□□□ -0.59
SCLT1-201ENST00000281142 GPC6Q9Y625 555 aaPredicted RBP11.38□□□□□ -0.59
SCLT1-201ENST00000281142 TRPC5OSA6NMA1 111 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 M0QYT0 321 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 DCLK1O15075 740 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 MTHFD1P11586 935 aaKnown RBP11.37□□□□□ -0.59
SCLT1-201ENST00000281142 ZNF12P17014 697 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 NR4A1P22736 598 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 TKTP29401 623 aaKnown RBP11.37□□□□□ -0.59
SCLT1-201ENST00000281142 KPNA1P52294 538 aaPredicted RBP11.37□□□□□ -0.59
SCLT1-201ENST00000281142 TRAP1Q12931 704 aaKnown RBP11.37□□□□□ -0.59
SCLT1-201ENST00000281142 EGFLAMQ63HQ2 1017 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 KDELC2Q7Z4H8 507 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 SLC2A14Q8TDB8 520 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 TRPC4APQ8TEL6 797 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 ACDQ96AP0 544 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 ITPKCQ96DU7 683 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 EFHD1Q9BUP0 239 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 EIF2AQ9BY44 585 aaKnown RBP11.37□□□□□ -0.59
SCLT1-201ENST00000281142 DNAI2Q9GZS0 605 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 NACA2Q9H009 215 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 ASB7Q9H672 318 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 ANKRD6Q9Y2G4 727 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 CLOCKO15516 846 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 GPC4O75487 556 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 ALDOCP09972 364 aaKnown RBP11.37□□□□□ -0.59
SCLT1-201ENST00000281142 CDH3P22223 829 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 DCKP27707 260 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 MATKP42679 507 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 GALNT2Q10471 571 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 SQLEQ14534 574 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 NR1D2Q14995 579 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 CLPPQ16740 277 aaPredicted RBP11.37□□□□□ -0.59
SCLT1-201ENST00000281142 SLC36A3Q495N2 470 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 ZNF789Q5FWF6 425 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 SAMD4BQ5PRF9 694 aaKnown RBP11.37□□□□□ -0.59
SCLT1-201ENST00000281142 RBM20Q5T481 1227 aaKnown RBP11.37□□□□□ -0.59
SCLT1-201ENST00000281142 ESRP1Q6NXG1 681 aaKnown RBP11.37□□□□□ -0.59
SCLT1-201ENST00000281142 CUZD1Q86UP6 607 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 SLC43A3Q8NBI5 491 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 CELF6Q96J87 481 aaKnown RBP11.37□□□□□ -0.59
SCLT1-201ENST00000281142 ELMO2Q96JJ3 720 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 TRMT13Q9NUP7 481 aaKnown RBP11.37□□□□□ -0.59
SCLT1-201ENST00000281142 TUBA8Q9NY65 449 aaPredicted RBP11.37□□□□□ -0.59
SCLT1-201ENST00000281142 MYLKQ15746 1914 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 NR5A2O00482 541 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 CLDN5O00501 218 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 UBFD1O14562 309 aaKnown RBP11.37□□□□□ -0.59
SCLT1-201ENST00000281142 BEST1O76090 585 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 MT-CYBP00156 380 aaPredicted RBP11.37□□□□□ -0.59
SCLT1-201ENST00000281142 RAB15P59190 212 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 RAB10P61026 200 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 ITGADQ13349 1161 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 C8orf82Q6P1X6 216 aaPredicted RBP11.37□□□□□ -0.59
SCLT1-201ENST00000281142 GALNT18Q6P9A2 607 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 SNX29P2Q8IUI4 249 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 WNT8BQ93098 351 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 TOP1MTQ969P6 601 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 DUS3LQ96G46 650 aaKnown RBP11.37□□□□□ -0.59
SCLT1-201ENST00000281142 NCKIPSDQ9NZQ3 722 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 MAP10Q9P2G4 905 aa11.37□□□□□ -0.59
SCLT1-201ENST00000281142 DHRS12A0PJE2 317 aa11.36□□□□□ -0.59
SCLT1-201ENST00000281142 SOBPA7XYQ1 873 aa11.36□□□□□ -0.59
SCLT1-201ENST00000281142 ACOX3O15254 700 aa11.36□□□□□ -0.59
SCLT1-201ENST00000281142 SNAP29O95721 258 aa11.36□□□□□ -0.59
SCLT1-201ENST00000281142 JCHAINP01591 159 aa11.36□□□□□ -0.59
SCLT1-201ENST00000281142 CYP2C9P11712 490 aa11.36□□□□□ -0.59
SCLT1-201ENST00000281142 NCK1P16333 377 aa11.36□□□□□ -0.59
SCLT1-201ENST00000281142 ARNTP27540 789 aa11.36□□□□□ -0.59
SCLT1-201ENST00000281142 GNL1P36915 607 aaPredicted RBP11.36□□□□□ -0.59
SCLT1-201ENST00000281142 HK2P52789 917 aa11.36□□□□□ -0.59
SCLT1-201ENST00000281142 BST2Q10589 180 aaKnown RBP11.36□□□□□ -0.59
SCLT1-201ENST00000281142 PAFAH1B3Q15102 231 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms