RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 PDHA1P08559 390 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 STMN1P16949 149 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 TARSP26639 723 aaKnown RBP21.01■□□□□ 0.95
YBX3-202ENST00000279550 ALYREFQ86V81 257 aaKnown RBP21.01■□□□□ 0.95
YBX3-202ENST00000279550 SMRP1Q8NCR6 262 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 BRSK1Q8TDC3 778 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 BPIFB1Q8TDL5 484 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 NXNL1Q96CM4 212 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 TDRD1Q9BXT4 1180 aaKnown RBP21.01■□□□□ 0.95
YBX3-202ENST00000279550 UNKQ9C0B0 810 aaKnown RBP21.01■□□□□ 0.95
YBX3-202ENST00000279550 OBP2AQ9NY56 170 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 VPS51Q9UID3 782 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 VPS28Q9UK41 221 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 ACOT9Q9Y305 439 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 BPTFQ12830 3046 aa21■□□□□ 0.95
YBX3-202ENST00000279550 CBX6O95503 412 aa21■□□□□ 0.95
YBX3-202ENST00000279550 GOT2P00505 430 aaKnown RBP21■□□□□ 0.95
YBX3-202ENST00000279550 PENKP01210 267 aaPredicted RBP21■□□□□ 0.95
YBX3-202ENST00000279550 FCARP24071 287 aa21■□□□□ 0.95
YBX3-202ENST00000279550 GRK2P25098 689 aa21■□□□□ 0.95
YBX3-202ENST00000279550 CRABP2P29373 138 aa21■□□□□ 0.95
YBX3-202ENST00000279550 MTHFRP42898 656 aa21■□□□□ 0.95
YBX3-202ENST00000279550 CLCN5P51795 746 aa21■□□□□ 0.95
YBX3-202ENST00000279550 AQP5P55064 265 aa21■□□□□ 0.95
YBX3-202ENST00000279550 ABCE1P61221 599 aaKnown RBP21■□□□□ 0.95
YBX3-202ENST00000279550 PRAMEP78395 509 aa21■□□□□ 0.95
YBX3-202ENST00000279550 SEMA3AQ14563 771 aa21■□□□□ 0.95
YBX3-202ENST00000279550 LRRC8EQ6NSJ5 796 aa21■□□□□ 0.95
YBX3-202ENST00000279550 ZYG11AQ6WRX3 759 aa21■□□□□ 0.95
YBX3-202ENST00000279550 CCDC91Q7Z6B0 441 aa21■□□□□ 0.95
YBX3-202ENST00000279550 TTC7BQ86TV6 843 aa21■□□□□ 0.95
YBX3-202ENST00000279550 OSCP1Q8WVF1 389 aa21■□□□□ 0.95
YBX3-202ENST00000279550 SCYL1Q96KG9 808 aa21■□□□□ 0.95
YBX3-202ENST00000279550 MYADMQ96S97 322 aa21■□□□□ 0.95
YBX3-202ENST00000279550 BBS2Q9BXC9 721 aa21■□□□□ 0.95
YBX3-202ENST00000279550 POMKQ9H5K3 350 aa21■□□□□ 0.95
YBX3-202ENST00000279550 TXLNGQ9NUQ3 528 aa21■□□□□ 0.95
YBX3-202ENST00000279550 PNPOQ9NVS9 261 aa21■□□□□ 0.95
YBX3-202ENST00000279550 DUS2Q9NX74 493 aaKnown RBP21■□□□□ 0.95
YBX3-202ENST00000279550 HAO1Q9UJM8 370 aa21■□□□□ 0.95
YBX3-202ENST00000279550 CLEC4EQ9ULY5 219 aa21■□□□□ 0.95
YBX3-202ENST00000279550 PCDHGC4Q9Y5F7 938 aa21■□□□□ 0.95
YBX3-202ENST00000279550 RAI2Q9Y5P3 530 aa21■□□□□ 0.95
YBX3-202ENST00000279550 HEPACAM2A8MVW5 462 aa20.99■□□□□ 0.95
YBX3-202ENST00000279550 TARM1B6A8C7 271 aa20.99■□□□□ 0.95
YBX3-202ENST00000279550 NEDD8-MDP1E9PL57 170 aa20.99■□□□□ 0.95
YBX3-202ENST00000279550 RPP40O75818 363 aaKnown RBP20.99■□□□□ 0.95
YBX3-202ENST00000279550 COL6A2P12110 1019 aa20.99■□□□□ 0.95
YBX3-202ENST00000279550 NQO1P15559 274 aaKnown RBP20.99■□□□□ 0.95
YBX3-202ENST00000279550 SKIV2L2P42285 1042 aaKnown RBP20.99■□□□□ 0.95
YBX3-202ENST00000279550 ZNF140P52738 457 aaPredicted RBP20.99■□□□□ 0.95
YBX3-202ENST00000279550 POU4F1Q01851 419 aa20.99■□□□□ 0.95
YBX3-202ENST00000279550 TRAF2Q12933 501 aa20.99■□□□□ 0.95
YBX3-202ENST00000279550 LY6G5CQ5SRR4 150 aa20.99■□□□□ 0.95
YBX3-202ENST00000279550 PRPF38BQ5VTL8 546 aaKnown RBP20.99■□□□□ 0.95
YBX3-202ENST00000279550 APCDD1Q8J025 514 aa20.99■□□□□ 0.95
YBX3-202ENST00000279550 LPCAT1Q8NF37 534 aa20.99■□□□□ 0.95
YBX3-202ENST00000279550 FIBINQ8TAL6 211 aa20.99■□□□□ 0.95
YBX3-202ENST00000279550 STYXQ8WUJ0 223 aa20.99■□□□□ 0.95
YBX3-202ENST00000279550 KLHL29Q96CT2 875 aa20.99■□□□□ 0.95
YBX3-202ENST00000279550 ZFP14Q9HCL3 533 aa20.99■□□□□ 0.95
YBX3-202ENST00000279550 ACSS2Q9NR19 701 aa20.99■□□□□ 0.95
YBX3-202ENST00000279550 FCF1Q9Y324 198 aaKnown RBP20.99■□□□□ 0.95
YBX3-202ENST00000279550 SPTBN5Q9NRC6 3674 aaKnown RBP20.99■□□□□ 0.95
YBX3-202ENST00000279550 CFAP73A6NFT4 308 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 FCHO1O14526 889 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 MT-CO1P00395 513 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 PTPRRQ15256 657 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 GALNT7Q86SF2 657 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 FSTL5Q8N475 847 aaPredicted RBP20.98■□□□□ 0.95
YBX3-202ENST00000279550 MOCOSQ96EN8 888 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 TSNARE1Q96NA8 513 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 TMEM237Q96Q45 408 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 GATA5Q9BWX5 397 aaPredicted RBP20.98■□□□□ 0.95
YBX3-202ENST00000279550 IGSF5Q9NSI5 407 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 ARL8BQ9NVJ2 186 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 OXSMQ9NWU1 459 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 MTF2Q9Y483 593 aaPredicted RBP20.98■□□□□ 0.95
YBX3-202ENST00000279550 K7ERQ8 282 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 APOA4P06727 396 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 PRSS56P0CW18 603 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 TYRP14679 529 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 ZBTB16Q05516 673 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 NSUN2Q08J23 767 aaKnown RBP eCLIP20.98■□□□□ 0.95
YBX3-202ENST00000279550 EML3Q32P44 896 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 TTC31Q49AM3 519 aaPredicted RBP20.98■□□□□ 0.95
YBX3-202ENST00000279550 SPDYAQ5MJ70 313 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 ATXN7L2Q5T6C5 722 aaPredicted RBP20.98■□□□□ 0.95
YBX3-202ENST00000279550 HECTD2Q5U5R9 776 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 TANGO2Q6ICL3 276 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 NCEH1Q6PIU2 408 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 MAVSQ7Z434 540 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 LCA5Q86VQ0 697 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 ST13P5Q8NFI4 369 aaPredicted RBP20.98■□□□□ 0.95
YBX3-202ENST00000279550 MDGA1Q8NFP4 955 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 RDH11Q8TC12 318 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 RMDN1Q96DB5 314 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 ASIC4Q96FT7 647 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 EBF4Q9BQW3 602 aa20.98■□□□□ 0.95
YBX3-202ENST00000279550 ARHGEF3Q9NR81 526 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms