RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 MCOLN2Q8IZK6 566 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 NLGN1Q8N2Q7 840 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 ZBTB44Q8NCP5 570 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 POMGNT1Q8WZA1 660 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 DDX1Q92499 740 aaKnown RBP9.24□□□□□ -0.93
PDGFC-201ENST00000274071 DYNLL2Q96FJ2 89 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 GPBP1L1Q9HC44 474 aaPredicted RBP9.24□□□□□ -0.93
PDGFC-201ENST00000274071 ZBTB26Q9HCK0 441 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 TUFT1Q9NNX1 390 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 FNIP2Q9P278 1114 aa9.24□□□□□ -0.93
PDGFC-201ENST00000274071 MYH9P35579 1960 aaKnown RBP9.24□□□□□ -0.93
PDGFC-201ENST00000274071 FRMPD2Q68DX3 1309 aaPredicted RBP9.23□□□□□ -0.93
PDGFC-201ENST00000274071 CIB4A0PJX0 185 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 HEATR9A2RTY3 570 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 CAPN5O15484 640 aaPredicted RBP9.23□□□□□ -0.93
PDGFC-201ENST00000274071 PTP4A3O75365 173 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 TCF4P15884 667 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 SHMT2P34897 504 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 RPS9P46781 194 aaKnown RBP9.23□□□□□ -0.93
PDGFC-201ENST00000274071 OLR1P78380 273 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 S100A12P80511 92 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 FAPQ12884 760 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 RIN1Q13671 783 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 GRM7Q14831 915 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 MFSD14BQ5SR56 506 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 TREML2Q5T2D2 321 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 STXBP5Q5T5C0 1151 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 IRAK1BP1Q5VVH5 260 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 LETMD1Q6P1Q0 360 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 BRAT1Q6PJG6 821 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 PHC2Q8IXK0 858 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 RCOR2Q8IZ40 523 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 MCFD2Q8NI22 146 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 SLC35B2Q8TB61 432 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 VTI1AQ96AJ9 217 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 CENPNQ96H22 339 aaPredicted RBP9.23□□□□□ -0.93
PDGFC-201ENST00000274071 KREMEN1Q96MU8 473 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 ZNF578Q96N58 590 aaPredicted RBP9.23□□□□□ -0.93
PDGFC-201ENST00000274071 PIP5K1AQ99755 562 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 BEX2Q9BXY8 128 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 ING2Q9H160 280 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 ZNF385DQ9H6B1 395 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 SP110Q9HB58 689 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 MKNK2Q9HBH9 465 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 ASNSD1Q9NWL6 643 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.23□□□□□ -0.93
PDGFC-201ENST00000274071 KIAA1551Q9HCM1 1747 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 CALCAP01258 141 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 PRKCGP05129 697 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 PCSK2P16519 638 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 RPL9P32969 192 aaKnown RBP9.23□□□□□ -0.93
PDGFC-201ENST00000274071 GP5P40197 560 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 IL12RB1P42701 662 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 ERVK-21P61565 698 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 SLAMF1Q13291 335 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 MFSD10Q14728 455 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 DDR2Q16832 855 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 EPC2Q52LR7 807 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 DHFR2Q86XF0 187 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 MAPKAPK5Q8IW41 473 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 SP8Q8IXZ3 490 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 CNTD1Q8N815 330 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 FNDC5Q8NAU1 212 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 ST13P5Q8NFI4 369 aaPredicted RBP9.23□□□□□ -0.93
PDGFC-201ENST00000274071 SLC22A17Q8WUG5 538 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 ZHX1-C8orf76Q96EF9 292 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 NECTIN4Q96NY8 510 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 UNC93B1Q9H1C4 597 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 PLAC1Q9HBJ0 212 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 TM9SF3Q9HD45 589 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 MRPL40Q9NQ50 206 aaKnown RBP9.23□□□□□ -0.93
PDGFC-201ENST00000274071 GPRC5CQ9NQ84 441 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 TLR9Q9NR96 1032 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 CD300AQ9UGN4 299 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 KLF15Q9UIH9 416 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 TRMT6Q9UJA5 497 aaKnown RBP9.23□□□□□ -0.93
PDGFC-201ENST00000274071 PCDHB12Q9Y5F1 795 aa9.23□□□□□ -0.93
PDGFC-201ENST00000274071 MEIS1O00470 390 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 PPEF1O14829 653 aaPredicted RBP9.22□□□□□ -0.93
PDGFC-201ENST00000274071 SLC22A2O15244 555 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 ALBP02768 609 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 HMGN1P05114 100 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 IL7RP16871 459 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 TFE3P19532 575 aaPredicted RBP9.22□□□□□ -0.93
PDGFC-201ENST00000274071 PCMT1P22061 227 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 KELP23276 732 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 PRKCHP24723 683 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 FASP25445 335 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 TGFBR1P36897 503 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 NRLP54845 237 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 SNRPD2P62316 118 aaKnown RBP9.22□□□□□ -0.93
PDGFC-201ENST00000274071 SP140Q13342 867 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 BCL7AQ4VC05 210 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 TMPRSS9Q7Z410 1059 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 PARP16Q8N5Y8 322 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 C2orf69Q8N8R5 385 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 SMG8Q8ND04 991 aaKnown RBP9.22□□□□□ -0.93
PDGFC-201ENST00000274071 CPA5Q8WXQ8 436 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 ELMO1Q92556 727 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 NEDD4LQ96PU5 975 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms