RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 UGT3A2Q3SY77 523 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 CYBRD1Q53TN4 286 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 TECRLQ5HYJ1 363 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 ADGRG5Q8IZF4 528 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 PPHLN1Q8NEY8 458 aaKnown RBP12.93□□□□□ -0.34
COL8A1-202ENST00000273342 GABPB2Q8TAK5 448 aaPredicted RBP12.93□□□□□ -0.34
COL8A1-202ENST00000273342 AFG1LQ8WV93 481 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 UHRF1Q96T88 793 aaPredicted RBP12.93□□□□□ -0.34
COL8A1-202ENST00000273342 HEPHQ9BQS7 1158 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 C9orf16Q9BUW7 83 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 SMPD3Q9NY59 655 aaPredicted RBP12.93□□□□□ -0.34
COL8A1-202ENST00000273342 PKD2L2Q9NZM6 624 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 NDUFAF1Q9Y375 327 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 DNAJC15Q9Y5T4 150 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 LGALS2P05162 132 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 HGFP14210 728 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 ARCN1P48444 511 aaKnown RBP12.93□□□□□ -0.34
COL8A1-202ENST00000273342 HK2P52789 917 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 PRKAA2P54646 552 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 PDCD4Q53EL6 469 aaKnown RBP12.93□□□□□ -0.34
COL8A1-202ENST00000273342 ANKRD34AQ69YU3 496 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 LARP4Q71RC2 724 aaKnown RBP eCLIP12.93□□□□□ -0.34
COL8A1-202ENST00000273342 ITIH5Q86UX2 942 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 IGFN1Q86VF2 1251 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 HSFY1Q96LI6 401 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 CCDC90BQ9GZT6 254 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 TXNRD2Q9NNW7 524 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 ARMC1Q9NVT9 282 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 TSC22D4Q9Y3Q8 395 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 BRWD3Q6RI45 1802 aa12.93□□□□□ -0.34
COL8A1-202ENST00000273342 NCF1BA6NI72 391 aaPredicted RBP12.92□□□□□ -0.34
COL8A1-202ENST00000273342 ZBBXA8MT70 800 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 NCF1CA8MVU1 366 aaPredicted RBP12.92□□□□□ -0.34
COL8A1-202ENST00000273342 ADM5C9JUS6 153 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 PTGES3LE9PB15 166 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 DAB1O75553 588 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 NCF1P14598 390 aaPredicted RBP12.92□□□□□ -0.34
COL8A1-202ENST00000273342 GPX3P22352 226 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 SLC6A2P23975 617 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 DCKP27707 260 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 EEF1DP29692 281 aaKnown RBP12.92□□□□□ -0.34
COL8A1-202ENST00000273342 HOXD12P35452 270 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 CAPGP40121 348 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 HADHAP40939 763 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 TPD52P55327 224 aaPredicted RBP12.92□□□□□ -0.34
COL8A1-202ENST00000273342 NFYCQ13952 458 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 VGLL4Q14135 290 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 PTPRCAPQ14761 206 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 PFKFB4Q16877 469 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 AGAP9Q5VTM2 703 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 WSCD1Q658N2 575 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 EXOC8Q8IYI6 725 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 TRPC4APQ8TEL6 797 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 ZC3H15Q8WU90 426 aaKnown RBP12.92□□□□□ -0.34
COL8A1-202ENST00000273342 SNX19Q92543 992 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 TOP1MTQ969P6 601 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 ESAMQ96AP7 390 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 TAMM41Q96BW9 452 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 KLRG1Q96E93 195 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 TEX37Q96LM6 180 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 CSF3RQ99062 836 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 C1orf50Q9BV19 199 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 LHPPQ9H008 270 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 GSTO2Q9H4Y5 243 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 ZNF408Q9H9D4 720 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 WDR6Q9NNW5 1121 aaKnown RBP12.92□□□□□ -0.34
COL8A1-202ENST00000273342 NDFIP2Q9NV92 336 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 GID8Q9NWU2 228 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 PHIPQ8WWQ0 1821 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 NPR3P17342 541 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 RAD23AP54725 363 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 DNASE1L3Q13609 305 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 BTG3Q14201 252 aaPredicted RBP12.92□□□□□ -0.34
COL8A1-202ENST00000273342 MAPK11Q15759 364 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 FAM45BPQ6NSW5 357 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 TMEM53Q6P2H8 277 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 CLEC20AQ6ZU45 233 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 UNC93AQ86WB7 457 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 SLC7A5P1Q8MH63 180 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 FAM45AQ8TCE6 357 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 C12orf42Q96LP6 360 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 HBEGFQ99075 208 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 POLE4Q9NR33 117 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 TMEM30AQ9NV96 361 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 TCAF1Q9Y4C2 921 aa12.92□□□□□ -0.34
COL8A1-202ENST00000273342 LAMA2P24043 3122 aaKnown RBP12.92□□□□□ -0.34
COL8A1-202ENST00000273342 FXYD1O00168 92 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 MOCS2O96007 188 aaPredicted RBP12.91□□□□□ -0.34
COL8A1-202ENST00000273342 LTA4HP09960 611 aaKnown RBP12.91□□□□□ -0.34
COL8A1-202ENST00000273342 SHMT2P34897 504 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 ARL1P40616 181 aaPredicted RBP12.91□□□□□ -0.34
COL8A1-202ENST00000273342 PSMD8P48556 350 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 CSRP3P50461 194 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 SPIDRQ14159 915 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 PGS1Q32NB8 556 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 TMEM207Q6UWW9 146 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 HS3ST5Q8IZT8 346 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 CLEC4FQ8N1N0 589 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 MFSD2AQ8NA29 543 aa12.91□□□□□ -0.34
COL8A1-202ENST00000273342 SLC35B4Q969S0 331 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms