RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 HOXB8P17481 243 aaPredicted RBP16.64■□□□□ 0.25
CCDC40-201ENST00000269318 PTPN4P29074 926 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 CD70P32970 193 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 ABL2P42684 1182 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 NAGLUP54802 743 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 PFKPQ01813 784 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 USP4Q13107 963 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 RCN2Q14257 317 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 PTPRRQ15256 657 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 GPR158Q5T848 1215 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 SDCCAG8Q86SQ7 713 aaPredicted RBP16.64■□□□□ 0.25
CCDC40-201ENST00000269318 PIM3Q86V86 326 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 TREML1Q86YW5 311 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 TXNDC5Q8NBS9 432 aaKnown RBP16.64■□□□□ 0.25
CCDC40-201ENST00000269318 PDCD6IPQ8WUM4 868 aaKnown RBP16.64■□□□□ 0.25
CCDC40-201ENST00000269318 RILPQ96NA2 401 aa16.64■□□□□ 0.25
CCDC40-201ENST00000269318 INTS6Q9UL03 887 aaKnown RBP16.64■□□□□ 0.25
CCDC40-201ENST00000269318 MTF2Q9Y483 593 aaPredicted RBP16.64■□□□□ 0.25
CCDC40-201ENST00000269318 LINC01553A4QN01 128 aa16.63■□□□□ 0.25
CCDC40-201ENST00000269318 CALB2P22676 271 aa16.63■□□□□ 0.25
CCDC40-201ENST00000269318 PLK1P53350 603 aa16.63■□□□□ 0.25
CCDC40-201ENST00000269318 DNAJB13P59910 316 aa16.63■□□□□ 0.25
CCDC40-201ENST00000269318 CAMK1Q14012 370 aa16.63■□□□□ 0.25
CCDC40-201ENST00000269318 ACAP2Q15057 778 aa16.63■□□□□ 0.25
CCDC40-201ENST00000269318 PLEKHG6Q3KR16 790 aa16.63■□□□□ 0.25
CCDC40-201ENST00000269318 SPRED2Q7Z698 418 aa16.63■□□□□ 0.25
CCDC40-201ENST00000269318 PARP9Q8IXQ6 854 aa16.63■□□□□ 0.25
CCDC40-201ENST00000269318 CMTM8Q8IZV2 173 aa16.63■□□□□ 0.25
CCDC40-201ENST00000269318 C17orf80Q9BSJ5 609 aa16.63■□□□□ 0.25
CCDC40-201ENST00000269318 AARSD1Q9BTE6 412 aaKnown RBP16.63■□□□□ 0.25
CCDC40-201ENST00000269318 CCDC106Q9BWC9 280 aa16.63■□□□□ 0.25
CCDC40-201ENST00000269318 TM6SF2Q9BZW4 377 aa16.63■□□□□ 0.25
CCDC40-201ENST00000269318 TLE6Q9H808 572 aa16.63■□□□□ 0.25
CCDC40-201ENST00000269318 ACSS2Q9NR19 701 aa16.63■□□□□ 0.25
CCDC40-201ENST00000269318 MAN1C1Q9NR34 630 aa16.63■□□□□ 0.25
CCDC40-201ENST00000269318 POLR3BQ9NW08 1133 aaPredicted RBP16.63■□□□□ 0.25
CCDC40-201ENST00000269318 RAP2CQ9Y3L5 183 aa16.63■□□□□ 0.25
CCDC40-201ENST00000269318 PCDHB9Q9Y5E1 797 aa16.63■□□□□ 0.25
CCDC40-201ENST00000269318 ZNF821O75541 412 aaPredicted RBP16.62■□□□□ 0.25
CCDC40-201ENST00000269318 FGF19O95750 216 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 ATP5F1P24539 256 aaPredicted RBP16.62■□□□□ 0.25
CCDC40-201ENST00000269318 DDX6P26196 483 aaKnown RBP eCLIP16.62■□□□□ 0.25
CCDC40-201ENST00000269318 CCR10P46092 362 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 CSNK1DP48730 415 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 UBE3AQ05086 875 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 TEAD2Q15562 447 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 ARL13AQ5H913 290 aaPredicted RBP16.62■□□□□ 0.25
CCDC40-201ENST00000269318 VWA5B1Q5TIE3 1220 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 LSMEM2Q8N112 164 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 EFHBQ8N7U6 833 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 LPGAT1Q92604 370 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 TCF12Q99081 682 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 TBC1D10AQ9BXI6 508 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 ILKAPQ9H0C8 392 aaPredicted RBP16.62■□□□□ 0.25
CCDC40-201ENST00000269318 COG4Q9H9E3 785 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 POPDC3Q9HBV1 291 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 ABCB8Q9NUT2 735 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 HACD3Q9P035 362 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 H7C0S8 307 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 PGLSO95336 258 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 SLC4A1P02730 911 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 RBP1P09455 135 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 PTPN2P17706 415 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 MPSTP25325 297 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 PMLP29590 882 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 IRS1P35568 1242 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 ALDH18A1P54886 795 aaKnown RBP16.62■□□□□ 0.25
CCDC40-201ENST00000269318 RIPK1Q13546 671 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 SLC5A9Q2M3M2 681 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 KLC3Q6P597 504 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 EPGNQ6UW88 154 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 PIH1D2Q8WWB5 315 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 SGF29Q96ES7 293 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 RAB3IPQ96QF0 476 aaPredicted RBP16.62■□□□□ 0.25
CCDC40-201ENST00000269318 MIPEPQ99797 713 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 FKBPLQ9UIM3 349 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 SORCS3Q9UPU3 1222 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 APOBEC2Q9Y235 224 aaKnown RBP16.62■□□□□ 0.25
CCDC40-201ENST00000269318 DOCK6Q96HP0 2047 aa16.62■□□□□ 0.25
CCDC40-201ENST00000269318 CXorf51AA0A1B0GTR3 108 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 NEMP2A6NFY4 417 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 C5orf67F2Z3F1 127 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 NPHS1O60500 1241 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 ARHGEF15O94989 841 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 PIGNO95427 931 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 PRAMEF12O95522 483 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 RHOP08100 348 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 KCNA5P22460 613 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 HOXA9P31269 272 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 ASPHQ12797 758 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 CAMK1DQ8IU85 385 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 OR6K2Q8NGY2 324 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 USP13Q92995 863 aaPredicted RBP16.61■□□□□ 0.25
CCDC40-201ENST00000269318 VOPP1Q96AW1 172 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 MYO19Q96H55 970 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 MAGEE1Q9HCI5 957 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 STK38LQ9Y2H1 464 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 MED16Q9Y2X0 877 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 RWDD3Q9Y3V2 267 aa16.61■□□□□ 0.25
CCDC40-201ENST00000269318 A0A0U1RQS6 177 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms