RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 E7ENX8 843 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SOCS2O14508 198 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ENPP3O14638 875 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 KDM1AO60341 852 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TADA2AO75478 443 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PGAM1P18669 254 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TFEBP19484 476 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 GARSP41250 739 aaKnown RBP16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 DAOAP59103 153 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PHKG1Q16816 387 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ARL13AQ5H913 290 aaPredicted RBP16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TTC33Q6PID6 262 aaPredicted RBP16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 MRPL10Q7Z7H8 261 aaKnown RBP16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 RAVER1Q8IY67 606 aaKnown RBP16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 NT5C3BQ969T7 300 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SPATA13Q96N96 652 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 RGS18Q9NS28 235 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 GNPTGQ9UJJ9 305 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ERGIC3Q9Y282 383 aa16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 COPG1Q9Y678 874 aaKnown RBP16.01■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ESRRBO95718 433 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 C8BP07358 591 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ERCC2P18074 760 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ADRA1BP35368 520 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 RHDQ02161 417 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TRIM16LQ309B1 348 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CD300LGQ6UXG3 332 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 C4orf22Q6V702 233 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 GK5Q6ZS86 529 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PID1Q7Z2X4 250 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PCYOX1LQ8NBM8 494 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 FAM110BQ8TC76 370 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 LPGAT1Q92604 370 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 NMRAL1Q9HBL8 299 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CDYLQ9Y232 598 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 RAP2CQ9Y3L5 183 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PCDHGA7Q9Y5G6 932 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CFAP99D6REC4 459 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ZNF623O75123 536 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TIPRLO75663 272 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ACRP10323 421 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TCEA1P23193 301 aaKnown RBP16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 GRIA4P48058 902 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 GSSP48637 474 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PCYT1AP49585 367 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PGGT1BP53609 377 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PSME3P61289 254 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 PMS2P3Q13401 168 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SF3B4Q15427 424 aaKnown RBP eCLIP16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 MOGQ16653 247 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 LRRC26Q2I0M4 334 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 FSTL4Q6MZW2 842 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ANKRD26P1Q6NSI1 321 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TMEM26Q6ZUK4 368 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TMEM173Q86WV6 379 aaPredicted RBP16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ZNF567Q8N184 647 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SREK1Q8WXA9 508 aaKnown RBP16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 KCTD13Q8WZ19 329 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 HPS1Q92902 700 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 EHD1Q9H4M9 534 aa16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 WDR6Q9NNW5 1121 aaKnown RBP16■□□□□ 0.15
MAP1LC3B-201ENST00000268607 A8MU76 341 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ZNF487B1APH4 448 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 FAM47E-STBD1D6RA91 191 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ZNF701M0R085 212 aaPredicted RBP15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 HSPA8P11142 646 aaKnown RBP15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ZNF182P17025 639 aaPredicted RBP15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 LHX1P48742 406 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 MAPK10P53779 464 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 RFTN1Q14699 578 aaPredicted RBP15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CHSY3Q70JA7 882 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 STRA8Q7Z7C7 330 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TFAP2CQ92754 450 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 MYLPFQ96A32 169 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CERS2Q96G23 380 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SLC2A13Q96QE2 648 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 AGAP2Q99490 1192 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 RTP3Q9BQQ7 232 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 NPLQ9BXD5 320 aaPredicted RBP15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TBC1D13Q9NVG8 400 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TMLHEQ9NVH6 421 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 OXSMQ9NWU1 459 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TIMM22Q9Y584 194 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TK2O00142 265 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 EML3Q32P44 896 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 GRTP1Q5TC63 336 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 GLB1LQ6UWU2 654 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 ACVR1CQ8NER5 493 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SCAMP5Q8TAC9 235 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CPNE1Q99829 537 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SCHIP1Q9P0W5 487 aaPredicted RBP15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 IPO11Q9UI26 975 aaKnown RBP15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 NUDT5Q9UKK9 219 aa15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 CNOT6Q9ULM6 557 aaKnown RBP15.99■□□□□ 0.15
MAP1LC3B-201ENST00000268607 TDRD15B5MCY1 1934 aaKnown RBP15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 C1orf232A0A0U1RR37 186 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 SAC3D1A6NKF1 404 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 NAGLUP54802 743 aa15.98■□□□□ 0.15
MAP1LC3B-201ENST00000268607 HERC3Q15034 1050 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms