RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 TBC1D25Q3MII6 688 aa12.12□□□□□ -0.47
SRRM4-201ENST00000267260 NOL9Q5SY16 702 aaKnown RBP12.12□□□□□ -0.47
SRRM4-201ENST00000267260 FAM98AQ8NCA5 519 aaKnown RBP12.12□□□□□ -0.47
SRRM4-201ENST00000267260 RTKNQ9BST9 563 aa12.12□□□□□ -0.47
SRRM4-201ENST00000267260 COPS4Q9BT78 406 aa12.12□□□□□ -0.47
SRRM4-201ENST00000267260 C2orf49Q9BVC5 232 aaPredicted RBP12.12□□□□□ -0.47
SRRM4-201ENST00000267260 RSPH9Q9H1X1 276 aaPredicted RBP12.12□□□□□ -0.47
SRRM4-201ENST00000267260 ANKZF1Q9H8Y5 726 aa12.12□□□□□ -0.47
SRRM4-201ENST00000267260 TRPS1Q9UHF7 1281 aa12.12□□□□□ -0.47
SRRM4-201ENST00000267260 TRIM64CA6NLI5 447 aa12.12□□□□□ -0.47
SRRM4-201ENST00000267260 SLC28A2O43868 658 aa12.12□□□□□ -0.47
SRRM4-201ENST00000267260 HMGCRP04035 888 aa12.12□□□□□ -0.47
SRRM4-201ENST00000267260 IFI30P13284 250 aa12.12□□□□□ -0.47
SRRM4-201ENST00000267260 SSTR1P30872 391 aa12.12□□□□□ -0.47
SRRM4-201ENST00000267260 NPTX2P47972 431 aa12.12□□□□□ -0.47
SRRM4-201ENST00000267260 SPATA19Q7Z5L4 167 aa12.12□□□□□ -0.47
SRRM4-201ENST00000267260 CPB2Q96IY4 423 aa12.12□□□□□ -0.47
SRRM4-201ENST00000267260 DDX43Q9NXZ2 648 aaKnown RBP12.12□□□□□ -0.47
SRRM4-201ENST00000267260 KDM6BO15054 1643 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 RFXANKO14593 260 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 HGFP14210 728 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 SPERTQ8NA61 448 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 CELF1Q92879 486 aaKnown RBP12.11□□□□□ -0.47
SRRM4-201ENST00000267260 TAMM41Q96BW9 452 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 TBATAQ96M53 351 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 PFDN5Q99471 154 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 SPATA9Q9BWV2 254 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 ABCC13Q9NSE7 274 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 SOHLH2Q9NX45 425 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 TAS2R7Q9NYW3 318 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 RAB21Q9UL25 225 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 REXO2Q9Y3B8 237 aaKnown RBP12.11□□□□□ -0.47
SRRM4-201ENST00000267260 TMEM94Q12767 1356 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 ENDOD1O94919 500 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 WEE1P30291 646 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 STXBP1P61764 594 aaKnown RBP12.11□□□□□ -0.47
SRRM4-201ENST00000267260 ABRQ12979 859 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 ZNF720Q7Z2F6 126 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 NAT14Q8WUY8 206 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 HEXDCQ8WVB3 486 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 ISCA1Q9BUE6 129 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 XPNPEP3Q9NQH7 507 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 ATF5Q9Y2D1 282 aaPredicted RBP12.11□□□□□ -0.47
SRRM4-201ENST00000267260 NOTOA8MTQ0 251 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 NUAK1O60285 661 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 CES1P23141 567 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 AFF1P51825 1210 aaKnown RBP12.11□□□□□ -0.47
SRRM4-201ENST00000267260 ACE2Q9BYF1 805 aaPredicted RBP12.11□□□□□ -0.47
SRRM4-201ENST00000267260 NKIRAS2Q9NYR9 191 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 MAU2Q9Y6X3 613 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 ALKQ9UM73 1620 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 H0YJX3 145 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 CYP4B1P13584 511 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 OVOS1Q6IE37 1185 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 BEND5Q7L4P6 421 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 TFAP2DQ7Z6R9 452 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 OR5T3Q8NGG3 340 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 DNAJB14Q8TBM8 379 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 TSEN15Q8WW01 171 aaKnown RBP12.11□□□□□ -0.47
SRRM4-201ENST00000267260 CNPPD1Q9BV87 410 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 GULP1Q9UBP9 304 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 SLC27A6Q9Y2P4 619 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 DGKBQ9Y6T7 804 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 LOXHD1Q8IVV2 1947 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 DCKP27707 260 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 SWT1Q5T5J6 900 aaKnown RBP12.11□□□□□ -0.47
SRRM4-201ENST00000267260 PARP8Q8N3A8 854 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 PCDH20Q8N6Y1 951 aaKnown RBP12.11□□□□□ -0.47
SRRM4-201ENST00000267260 AENQ8WTP8 325 aaKnown RBP12.11□□□□□ -0.47
SRRM4-201ENST00000267260 PANX1Q96RD7 426 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 PLEKHA1Q9HB21 404 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 PAK6Q9NQU5 681 aaPredicted RBP12.11□□□□□ -0.47
SRRM4-201ENST00000267260 KBTBD4Q9NVX7 518 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 DISP1Q96F81 1524 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 CLDN25C9JDP6 229 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 CCR3P51677 355 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 PRKAG1P54619 331 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 RAB10P61026 200 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 PDK4Q16654 411 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 PABPC1LQ4VXU2 614 aaKnown RBP12.11□□□□□ -0.47
SRRM4-201ENST00000267260 TTI2Q6NXR4 508 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 ZNF730Q6ZMV8 503 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 DNERQ8NFT8 737 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 RNF31Q96EP0 1072 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 SHROOM3Q8TF72 1996 aa12.11□□□□□ -0.47
SRRM4-201ENST00000267260 PPP3R1P63098 170 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 TTMPQ5BVD1 217 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 TMEM86AQ8N2M4 240 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 ING5Q8WYH8 240 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 FCRL4Q96PJ5 515 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 COMMD4Q9H0A8 199 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 ATP13A1Q9HD20 1204 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 IFT80Q9P2H3 777 aaPredicted RBP12.1□□□□□ -0.47
SRRM4-201ENST00000267260 HACL1Q9UJ83 578 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 TFR2Q9UP52 801 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 MTHFRP42898 656 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 TRIM28Q13263 835 aaKnown RBP12.1□□□□□ -0.47
SRRM4-201ENST00000267260 ZCCHC12Q6PEW1 402 aa12.1□□□□□ -0.47
SRRM4-201ENST00000267260 ZNF571Q7Z3V5 609 aaPredicted RBP12.1□□□□□ -0.47
SRRM4-201ENST00000267260 OR10H5Q8NGA6 315 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms