RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 TDRD10Q5VZ19 366 aaKnown RBP8.79□□□□□ -1
VAPB-201ENST00000265619 CCBE1Q6UXH8 406 aaPredicted RBP8.79□□□□□ -1
VAPB-201ENST00000265619 SPRED1Q7Z699 444 aa8.79□□□□□ -1
VAPB-201ENST00000265619 DPP9Q86TI2 863 aa8.79□□□□□ -1
VAPB-201ENST00000265619 KCTD6Q8NC69 237 aa8.79□□□□□ -1
VAPB-201ENST00000265619 JPH3Q8WXH2 748 aaPredicted RBP8.79□□□□□ -1
VAPB-201ENST00000265619 BTN2A3PQ96KV6 586 aa8.79□□□□□ -1
VAPB-201ENST00000265619 EFHD1Q9BUP0 239 aa8.79□□□□□ -1
VAPB-201ENST00000265619 BEX2Q9BXY8 128 aa8.79□□□□□ -1
VAPB-201ENST00000265619 PDZD7Q9H5P4 517 aa8.79□□□□□ -1
VAPB-201ENST00000265619 C1orf112Q9NSG2 853 aa8.79□□□□□ -1
VAPB-201ENST00000265619 CYTH4Q9UIA0 394 aa8.79□□□□□ -1
VAPB-201ENST00000265619 ZNF112Q9UJU3 913 aa8.79□□□□□ -1
VAPB-201ENST00000265619 PCDHA11Q9Y5I1 949 aa8.79□□□□□ -1
VAPB-201ENST00000265619 PMM2O15305 246 aa8.78□□□□□ -1
VAPB-201ENST00000265619 UPK1BO75841 260 aa8.78□□□□□ -1
VAPB-201ENST00000265619 HLA-DRAP01903 254 aa8.78□□□□□ -1
VAPB-201ENST00000265619 GJB1P08034 283 aa8.78□□□□□ -1
VAPB-201ENST00000265619 NCK1P16333 377 aa8.78□□□□□ -1
VAPB-201ENST00000265619 CRHBPP24387 322 aa8.78□□□□□ -1
VAPB-201ENST00000265619 GJA5P36382 358 aa8.78□□□□□ -1
VAPB-201ENST00000265619 GLRBP48167 497 aa8.78□□□□□ -1
VAPB-201ENST00000265619 CYP24A1Q07973 514 aa8.78□□□□□ -1
VAPB-201ENST00000265619 BROXQ5VW32 411 aa8.78□□□□□ -1
VAPB-201ENST00000265619 IL31Q6EBC2 164 aa8.78□□□□□ -1
VAPB-201ENST00000265619 STRADAQ7RTN6 431 aa8.78□□□□□ -1
VAPB-201ENST00000265619 TMEM130Q8N3G9 435 aa8.78□□□□□ -1
VAPB-201ENST00000265619 DNERQ8NFT8 737 aa8.78□□□□□ -1
VAPB-201ENST00000265619 ANGPTL6Q8NI99 470 aa8.78□□□□□ -1
VAPB-201ENST00000265619 HDAC2Q92769 488 aaKnown RBP8.78□□□□□ -1
VAPB-201ENST00000265619 MFSD3Q96ES6 412 aa8.78□□□□□ -1
VAPB-201ENST00000265619 DUS3LQ96G46 650 aaKnown RBP8.78□□□□□ -1
VAPB-201ENST00000265619 ST6GAL2Q96JF0 529 aa8.78□□□□□ -1
VAPB-201ENST00000265619 FAM213AQ9BRX8 229 aa8.78□□□□□ -1
VAPB-201ENST00000265619 MRPL9Q9BYD2 267 aaKnown RBP8.78□□□□□ -1
VAPB-201ENST00000265619 PRRG3Q9BZD7 231 aa8.78□□□□□ -1
VAPB-201ENST00000265619 CPNE5Q9HCH3 593 aa8.78□□□□□ -1
VAPB-201ENST00000265619 TUFT1Q9NNX1 390 aa8.78□□□□□ -1
VAPB-201ENST00000265619 CCM2LQ9NUG4 571 aaPredicted RBP8.78□□□□□ -1
VAPB-201ENST00000265619 GPATCH2LQ9NWQ4 482 aa8.78□□□□□ -1
VAPB-201ENST00000265619 SMPD3Q9NY59 655 aaPredicted RBP8.78□□□□□ -1
VAPB-201ENST00000265619 PCDHA10Q9Y5I2 948 aa8.78□□□□□ -1
VAPB-201ENST00000265619 NME4O00746 187 aa8.78□□□□□ -1
VAPB-201ENST00000265619 POLR1CO15160 346 aaPredicted RBP8.78□□□□□ -1
VAPB-201ENST00000265619 RBP1P09455 135 aa8.78□□□□□ -1
VAPB-201ENST00000265619 GSTM1P09488 218 aa8.78□□□□□ -1
VAPB-201ENST00000265619 DBTP11182 482 aaKnown RBP8.78□□□□□ -1
VAPB-201ENST00000265619 MAGEA3P43357 314 aa8.78□□□□□ -1
VAPB-201ENST00000265619 OR3A3P47888 321 aa8.78□□□□□ -1
VAPB-201ENST00000265619 GRIA4P48058 902 aa8.78□□□□□ -1
VAPB-201ENST00000265619 RARRES1P49788 294 aa8.78□□□□□ -1
VAPB-201ENST00000265619 RPL14P50914 215 aaKnown RBP8.78□□□□□ -1
VAPB-201ENST00000265619 C19orf57Q0VDD7 668 aa8.78□□□□□ -1
VAPB-201ENST00000265619 TAZQ16635 292 aa8.78□□□□□ -1
VAPB-201ENST00000265619 BSPRYQ5W0U4 402 aa8.78□□□□□ -1
VAPB-201ENST00000265619 CASC4Q6P4E1 433 aa8.78□□□□□ -1
VAPB-201ENST00000265619 MOXD1Q6UVY6 613 aa8.78□□□□□ -1
VAPB-201ENST00000265619 ZNF438Q7Z4V0 828 aa8.78□□□□□ -1
VAPB-201ENST00000265619 RETREG3Q86VR2 466 aa8.78□□□□□ -1
VAPB-201ENST00000265619 VSIG10LQ86VR7 867 aa8.78□□□□□ -1
VAPB-201ENST00000265619 CCDC28AQ8IWP9 274 aa8.78□□□□□ -1
VAPB-201ENST00000265619 SPATA6LQ8N4H0 392 aa8.78□□□□□ -1
VAPB-201ENST00000265619 DCLK2Q8N568 766 aa8.78□□□□□ -1
VAPB-201ENST00000265619 APPL2Q8NEU8 664 aa8.78□□□□□ -1
VAPB-201ENST00000265619 GLMNQ92990 594 aa8.78□□□□□ -1
VAPB-201ENST00000265619 PBXIP1Q96AQ6 731 aa8.78□□□□□ -1
VAPB-201ENST00000265619 DEPDC7Q96QD5 511 aa8.78□□□□□ -1
VAPB-201ENST00000265619 GDF15Q99988 308 aa8.78□□□□□ -1
VAPB-201ENST00000265619 RHNO1Q9BSD3 238 aa8.78□□□□□ -1
VAPB-201ENST00000265619 SDCBP2Q9H190 292 aa8.78□□□□□ -1
VAPB-201ENST00000265619 FBXO8Q9NRD0 319 aa8.78□□□□□ -1
VAPB-201ENST00000265619 ARMC1Q9NVT9 282 aa8.78□□□□□ -1
VAPB-201ENST00000265619 FBXL12Q9NXK8 326 aa8.78□□□□□ -1
VAPB-201ENST00000265619 DPP3Q9NY33 737 aa8.78□□□□□ -1
VAPB-201ENST00000265619 KCND2Q9NZV8 630 aa8.78□□□□□ -1
VAPB-201ENST00000265619 DCDC2Q9UHG0 476 aa8.78□□□□□ -1
VAPB-201ENST00000265619 ZNF221Q9UK13 617 aa8.78□□□□□ -1
VAPB-201ENST00000265619 ABT1Q9ULW3 272 aaKnown RBP8.78□□□□□ -1
VAPB-201ENST00000265619 SATB2Q9UPW6 733 aa8.78□□□□□ -1
VAPB-201ENST00000265619 GREB1LQ9C091 1923 aaPredicted RBP8.78□□□□□ -1
VAPB-201ENST00000265619 DOCK5Q9H7D0 1870 aa8.78□□□□□ -1
VAPB-201ENST00000265619 CITO14578 2027 aa8.78□□□□□ -1
VAPB-201ENST00000265619 A0A0U1RQS6 177 aa8.78□□□□□ -1
VAPB-201ENST00000265619 HAT1O14929 419 aa8.78□□□□□ -1
VAPB-201ENST00000265619 RGS20O76081 388 aa8.78□□□□□ -1
VAPB-201ENST00000265619 KRT8P05787 483 aa8.78□□□□□ -1
VAPB-201ENST00000265619 CAPN1P07384 714 aa8.78□□□□□ -1
VAPB-201ENST00000265619 MAP2K4P45985 399 aa8.78□□□□□ -1
VAPB-201ENST00000265619 RPS9P46781 194 aaKnown RBP8.78□□□□□ -1
VAPB-201ENST00000265619 PSMD8P48556 350 aa8.78□□□□□ -1
VAPB-201ENST00000265619 NAGLUP54802 743 aa8.78□□□□□ -1
VAPB-201ENST00000265619 CAPRIN1Q14444 709 aaKnown RBP8.78□□□□□ -1
VAPB-201ENST00000265619 NOMO1Q15155 1222 aa8.78□□□□□ -1
VAPB-201ENST00000265619 AGKQ53H12 422 aa8.78□□□□□ -1
VAPB-201ENST00000265619 BRMS1LQ5PSV4 323 aa8.78□□□□□ -1
VAPB-201ENST00000265619 STXBP5Q5T5C0 1151 aa8.78□□□□□ -1
VAPB-201ENST00000265619 METTL4Q8N3J2 472 aa8.78□□□□□ -1
VAPB-201ENST00000265619 FBXL6Q8N531 539 aa8.78□□□□□ -1
VAPB-201ENST00000265619 PAF1Q8N7H5 531 aa8.78□□□□□ -1
VAPB-201ENST00000265619 ITCHQ96J02 903 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms