RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 MYBPC1Q00872 1141 aa17.13■□□□□ 0.33
SRF-201ENST00000265354 UGT2A3Q6UWM9 527 aa17.13■□□□□ 0.33
SRF-201ENST00000265354 B3GNT9Q6UX72 402 aa17.13■□□□□ 0.33
SRF-201ENST00000265354 TAGAPQ8N103 731 aa17.13■□□□□ 0.33
SRF-201ENST00000265354 ACVR1CQ8NER5 493 aa17.13■□□□□ 0.33
SRF-201ENST00000265354 PRICKLE1Q96MT3 831 aaPredicted RBP17.13■□□□□ 0.33
SRF-201ENST00000265354 KATNAL1Q9BW62 490 aa17.13■□□□□ 0.33
SRF-201ENST00000265354 PNPLA8Q9NP80 782 aa17.13■□□□□ 0.33
SRF-201ENST00000265354 IMPAD1Q9NX62 359 aa17.13■□□□□ 0.33
SRF-201ENST00000265354 UXTQ9UBK9 157 aaPredicted RBP17.13■□□□□ 0.33
SRF-201ENST00000265354 HTRA2O43464 458 aaPredicted RBP17.12■□□□□ 0.33
SRF-201ENST00000265354 VPS26AO75436 327 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 BCAS2O75934 225 aaPredicted RBP17.12■□□□□ 0.33
SRF-201ENST00000265354 ATG7O95352 703 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 MTPNP58546 118 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 RHDQ02161 417 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 STRADAQ7RTN6 431 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 ASB9Q96DX5 294 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 CHID1Q9BWS9 393 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 CEP44Q9C0F1 390 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 ENTPD7Q9NQZ7 604 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 ZNF142P52746 1687 aaPredicted RBP17.12■□□□□ 0.33
SRF-201ENST00000265354 CAPN15O75808 1086 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 TOMM70O94826 608 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 GRIA2P42262 883 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 RENBPP51606 427 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 ZNF132P52740 706 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 MBTD1Q05BQ5 628 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 PRR23BQ6ZRT6 265 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 CYP2S1Q96SQ9 504 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 FEM1AQ9BSK4 669 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 EPS8L2Q9H6S3 715 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 TAS2R13Q9NYV9 303 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 PCDHGA3Q9Y5H0 932 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 N4BP2Q86UW6 1770 aaPredicted RBP17.12■□□□□ 0.33
SRF-201ENST00000265354 CBX4O00257 560 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 THP07101 528 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 CDH2P19022 906 aaPredicted RBP17.12■□□□□ 0.33
SRF-201ENST00000265354 HLA-DPA1P20036 260 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 OR1E1P30953 314 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 TTKP33981 857 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 NDST2P52849 883 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 TPTEP56180 551 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 PTPRNQ16849 979 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 EID3Q8N140 333 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 TWIST2Q8WVJ9 160 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 TAMM41Q96BW9 452 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 FCRL2Q96LA5 508 aaPredicted RBP17.12■□□□□ 0.33
SRF-201ENST00000265354 KCNA7Q96RP8 456 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 MOCS1Q9NZB8 636 aa17.12■□□□□ 0.33
SRF-201ENST00000265354 NOTOA8MTQ0 251 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 SLC7A1P30825 629 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 OR1G1P47890 313 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 SLC26A2P50443 739 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 HECTD2Q5U5R9 776 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 PIM3Q86V86 326 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 ZNF540Q8NDQ6 660 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 LPCAT1Q8NF37 534 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 DQX1Q8TE96 717 aaKnown RBP17.11■□□□□ 0.33
SRF-201ENST00000265354 HDAC2Q92769 488 aaKnown RBP17.11■□□□□ 0.33
SRF-201ENST00000265354 PLEKHA8Q96JA3 519 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 KLHL32Q96NJ5 620 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 MUC3BQ9H195 1237 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 TMEM161AQ9NX61 479 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 CNTN3Q9P232 1028 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 GMPR2Q9P2T1 348 aaKnown RBP17.11■□□□□ 0.33
SRF-201ENST00000265354 ZNF112Q9UJU3 913 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 PCDHGB4Q9UN71 923 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 PCDHGB5Q9Y5G0 923 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 A0A087X1B8 175 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 FAM72CH0Y354 149 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 ABCB1P08183 1280 aaPredicted RBP17.11■□□□□ 0.33
SRF-201ENST00000265354 INHBCP55103 352 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 DNASE1L3Q13609 305 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 FAM72AQ5TYM5 149 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 FAM72DQ6L9T8 149 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 ELMSAN1Q6PJG2 1045 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 UNC93AQ86WB7 457 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 FAM72BQ86X60 149 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 MARVELD2Q8N4S9 558 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 SLC45A3Q96JT2 553 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 SORT1Q99523 831 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 SEMA3CQ99985 751 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 OSBPL10Q9BXB5 764 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 SYTL2Q9HCH5 934 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 CCDC88AQ3V6T2 1871 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 SLC12A8A0AV02 714 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 H3BNX3 289 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 LRATO95237 230 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 SLC25A27O95847 323 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 PRDX6P30041 224 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 TNK2Q07912 1038 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 DEFB132Q7Z7B7 95 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 ZC3HC1Q86WB0 502 aaKnown RBP17.11■□□□□ 0.33
SRF-201ENST00000265354 CENPNQ96H22 339 aaPredicted RBP17.11■□□□□ 0.33
SRF-201ENST00000265354 VAT1Q99536 393 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 RHOBTB2Q9BYZ6 727 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.11■□□□□ 0.333e-10■■■□□ 18.3
SRF-201ENST00000265354 KLQ9UEF7 1012 aa17.11■□□□□ 0.33
SRF-201ENST00000265354 EIF3LQ9Y262 564 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms