RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 LIG3P49916 1009 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 DCDC1P59894 354 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 FAM193AP78312 1265 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 PDE1BQ01064 536 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 CAV1Q03135 178 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 ACVR1Q04771 509 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 FGL2Q14314 439 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 LRRC66Q68CR7 880 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 TBC1D3GQ6DHY5 549 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 TBC1D3CQ6IPX1 549 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 KDELC2Q7Z4H8 507 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 TSPAN33Q86UF1 283 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 FAM124AQ86V42 546 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 NRSN1Q8IZ57 195 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 TBC1D3Q8IZP1 549 aaPredicted RBP14.28□□□□□ -0.12
SSBP1-201ENST00000265304 EIF1ADQ8N9N8 165 aaKnown RBP14.28□□□□□ -0.12
SSBP1-201ENST00000265304 DENND6BQ8NEG7 585 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 OR52K1Q8NGK4 314 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 ART4Q93070 314 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 BIRC7Q96CA5 298 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 SGSM3Q96HU1 749 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 SIGLEC10Q96LC7 697 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 APOL2Q9BQE5 337 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 SLC17A9Q9BYT1 436 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 FOXP3Q9BZS1 431 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 IL22Q9GZX6 179 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 SEMA4AQ9H3S1 761 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 EBF2Q9HAK2 575 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 MRM3Q9HC36 420 aaKnown RBP14.28□□□□□ -0.12
SSBP1-201ENST00000265304 ITM2BQ9Y287 266 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 ZNF711Q9Y462 761 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 HS3ST3A1Q9Y663 406 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 DMDP11532 3685 aa14.28□□□□□ -0.12
SSBP1-201ENST00000265304 A0A1W2PPC4 97 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 MAGEB16A2A368 324 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 IGLON5A6NGN9 336 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 E7ESA3 106 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 H7C0S8 307 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 NDUFS2O75306 463 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 TM7SF2O76062 418 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 PCDH8O95206 1070 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 CLDN7O95471 211 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 PRKCGP05129 697 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 C6P13671 934 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 ADRA1DP25100 572 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 CD27P26842 260 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 HOXD12P35452 270 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 SPINT3P49223 89 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 PPP2CBP62714 309 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 PPP2CAP67775 309 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 RPL6Q02878 288 aaKnown RBP14.27□□□□□ -0.13
SSBP1-201ENST00000265304 LAMB3Q13751 1172 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 KCTD19Q17RG1 926 aaPredicted RBP14.27□□□□□ -0.13
SSBP1-201ENST00000265304 LRRC73Q5JTD7 316 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 IZUMO3Q5VZ72 239 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 ZC3H14Q6PJT7 736 aaKnown RBP14.27□□□□□ -0.13
SSBP1-201ENST00000265304 PPP1R21Q6ZMI0 780 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 LPCAT2Q7L5N7 544 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 NLRP9Q7RTR0 991 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 LYSMD3Q7Z3D4 306 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 TAB3Q8N5C8 712 aaPredicted RBP14.27□□□□□ -0.13
SSBP1-201ENST00000265304 SLC25A41Q8N5S1 370 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 TMEM145Q8NBT3 493 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 LRRN4CLQ8ND94 238 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 FAM174AQ8TBP5 190 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 DTD2Q96FN9 168 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 SERPINB12Q96P63 405 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 KIFC1Q9BW19 673 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 GDF3Q9NR23 364 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 RAD18Q9NS91 495 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 ZDHHC18Q9NUE0 388 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.27□□□□□ -0.13
SSBP1-201ENST00000265304 SNX24Q9Y343 169 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 GVINP1Q7Z2Y8 2422 aa14.27□□□□□ -0.13
SSBP1-201ENST00000265304 ARID1BQ8NFD5 2236 aaPredicted RBP14.27□□□□□ -0.13
SSBP1-201ENST00000265304 TP53BP1Q12888 1972 aaPredicted RBP14.27□□□□□ -0.13
SSBP1-201ENST00000265304 C1orf232A0A0U1RR37 186 aa14.26□□□□□ -0.13
SSBP1-201ENST00000265304 AGAP14A8MT82 685 aa14.26□□□□□ -0.13
SSBP1-201ENST00000265304 TOR1BO14657 336 aa14.26□□□□□ -0.13
SSBP1-201ENST00000265304 AURKAO14965 403 aa14.26□□□□□ -0.13
SSBP1-201ENST00000265304 MMP20O60882 483 aa14.26□□□□□ -0.13
SSBP1-201ENST00000265304 RECQL5O94762 991 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-201ENST00000265304 RHOBTB1O94844 696 aa14.26□□□□□ -0.13
SSBP1-201ENST00000265304 CRTAMO95727 393 aa14.26□□□□□ -0.13
SSBP1-201ENST00000265304 HOXC4P09017 264 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-201ENST00000265304 C1SP09871 688 aa14.26□□□□□ -0.13
SSBP1-201ENST00000265304 ELFN1P0C7U0 828 aa14.26□□□□□ -0.13
SSBP1-201ENST00000265304 LPOP22079 712 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-201ENST00000265304 TRIM23P36406 574 aa14.26□□□□□ -0.13
SSBP1-201ENST00000265304 NBL1P41271 181 aa14.26□□□□□ -0.13
SSBP1-201ENST00000265304 DPP6P42658 865 aa14.26□□□□□ -0.13
SSBP1-201ENST00000265304 ZNF140P52738 457 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-201ENST00000265304 ITGA8P53708 1063 aa14.26□□□□□ -0.13
SSBP1-201ENST00000265304 MRPS25P82663 173 aaKnown RBP14.26□□□□□ -0.13
SSBP1-201ENST00000265304 ARHGEF7Q14155 803 aa14.26□□□□□ -0.13
SSBP1-201ENST00000265304 TRADDQ15628 312 aa14.26□□□□□ -0.13
SSBP1-201ENST00000265304 SETMARQ53H47 684 aaPredicted RBP14.26□□□□□ -0.13
SSBP1-201ENST00000265304 PCID2Q5JVF3 399 aa14.26□□□□□ -0.13
SSBP1-201ENST00000265304 ZDHHC20Q5W0Z9 365 aa14.26□□□□□ -0.13
SSBP1-201ENST00000265304 SEL1L3Q68CR1 1132 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms