RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 PPP1R10Q96QC0 940 aaKnown RBP19.87■□□□□ 0.77
CSPG5-201ENST00000264723 KCTD14Q9BQ13 255 aaPredicted RBP19.87■□□□□ 0.77
CSPG5-201ENST00000264723 CATSPERZQ9NTU4 200 aa19.87■□□□□ 0.77
CSPG5-201ENST00000264723 MYO1GB0I1T2 1018 aa19.87■□□□□ 0.77
CSPG5-201ENST00000264723 E7ENX8 843 aa19.87■□□□□ 0.77
CSPG5-201ENST00000264723 CCNT2O60583 730 aaKnown RBP19.87■□□□□ 0.77
CSPG5-201ENST00000264723 SERPIND1P05546 499 aa19.87■□□□□ 0.77
CSPG5-201ENST00000264723 HSPA1AP0DMV8 641 aaKnown RBP19.87■□□□□ 0.77
CSPG5-201ENST00000264723 HSPA1BP0DMV9 641 aaKnown RBP19.87■□□□□ 0.77
CSPG5-201ENST00000264723 ARSAP15289 507 aa19.87■□□□□ 0.77
CSPG5-201ENST00000264723 TTC23LQ6PF05 361 aa19.87■□□□□ 0.77
CSPG5-201ENST00000264723 HMCESQ96FZ2 354 aa19.87■□□□□ 0.77
CSPG5-201ENST00000264723 GDAP2Q9NXN4 497 aa19.87■□□□□ 0.77
CSPG5-201ENST00000264723 PCDHGC4Q9Y5F7 938 aa19.87■□□□□ 0.77
CSPG5-201ENST00000264723 A0A0U1RQF3 1178 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 CAPN14A8MX76 684 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 GPR32O75388 356 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 IGFBP6P24592 240 aaPredicted RBP19.86■□□□□ 0.77
CSPG5-201ENST00000264723 TIFABQ6ZNK6 161 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 STK32CQ86UX6 486 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 PGAM4Q8N0Y7 254 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 ETAA1Q9NY74 926 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 PDLIM1O00151 329 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 TBL1XO60907 577 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 PIK3CGP48736 1102 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 BOP1Q14137 746 aaKnown RBP19.86■□□□□ 0.77
CSPG5-201ENST00000264723 FUT10Q6P4F1 479 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 POTEHQ6S545 545 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 AGMOQ6ZNB7 445 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 FIG4Q92562 907 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 PAIP1Q9H074 479 aaKnown RBP19.86■□□□□ 0.77
CSPG5-201ENST00000264723 VRTNQ9H8Y1 702 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 USP41Q3LFD5 358 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 TIGD2Q4W5G0 525 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 ANKS6Q68DC2 871 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 PDSS2Q86YH6 399 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 SMG8Q8ND04 991 aaKnown RBP19.86■□□□□ 0.77
CSPG5-201ENST00000264723 DGCR14Q96DF8 476 aaKnown RBP19.86■□□□□ 0.77
CSPG5-201ENST00000264723 MLPHQ9BV36 600 aaPredicted RBP19.86■□□□□ 0.77
CSPG5-201ENST00000264723 RIC8BQ9NVN3 520 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 VPS9D1Q9Y2B5 631 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 SNX5Q9Y5X3 404 aa19.86■□□□□ 0.77
CSPG5-201ENST00000264723 NCK1P16333 377 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 GTF2H3Q13889 308 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 ATP6AP1LQ52LC2 224 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 ZNF280BQ86YH2 543 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 OFCC1Q8IZS5 231 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 PRDM16Q9HAZ2 1276 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 FLRT1Q9NZU1 646 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 NRAPQ86VF7 1730 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 ARFGEF1Q9Y6D6 1849 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 A0A087X1B8 175 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 A0A0J9YYE9 177 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 CFAP99D6REC4 459 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 AURKAO14965 403 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 PARP8Q8N3A8 854 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 METTL6Q8TCB7 284 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 TRIB2Q92519 343 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 BTN2A3PQ96KV6 586 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 TCAF1Q9Y4C2 921 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 PTGES3LE9PB15 166 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 CLASP2O75122 1294 aaKnown RBP19.85■□□□□ 0.77
CSPG5-201ENST00000264723 INHAP05111 366 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 HLA-DQB2P05538 268 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 GALK1P51570 392 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 CCDC81Q6ZN84 652 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 ADCK2Q7Z695 626 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 RNF217Q8TC41 542 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 KHSRPQ92945 711 aaKnown RBP eCLIP19.85■□□□□ 0.77
CSPG5-201ENST00000264723 SORT1Q99523 831 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 CORO1BQ9BR76 489 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 HGH1Q9BTY7 390 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 EIF2B3Q9NR50 452 aaKnown RBP19.85■□□□□ 0.77
CSPG5-201ENST00000264723 GKN1Q9NS71 199 aa19.85■□□□□ 0.77
CSPG5-201ENST00000264723 PNMA8BQ9ULN7 279 aaPredicted RBP19.85■□□□□ 0.77
CSPG5-201ENST00000264723 A0A1B0GVG6 124 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 UBXN8O00124 270 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 MATN2O00339 956 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 CEP97Q8IW35 865 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 SPPL2BQ8TCT7 592 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 GRIN3AQ8TCU5 1115 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 MTFMTQ96DP5 389 aaKnown RBP19.84■□□□□ 0.77
CSPG5-201ENST00000264723 COMMD3-BMI1R4GMX3 469 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 ZNF197O14709 1029 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 FFAR3O14843 346 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 GPR42O15529 346 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 IRAK2O43187 625 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 SELPP16109 830 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 PPP3CCP48454 512 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 RPS24P62847 133 aaKnown RBP19.84■□□□□ 0.77
CSPG5-201ENST00000264723 AARS2Q5JTZ9 985 aaKnown RBP19.84■□□□□ 0.77
CSPG5-201ENST00000264723 RALGPS2Q86X27 583 aaPredicted RBP19.84■□□□□ 0.77
CSPG5-201ENST00000264723 H3BMM5 538 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 NRG1Q02297 640 aaPredicted RBP19.84■□□□□ 0.77
CSPG5-201ENST00000264723 BCL2L1Q07817 233 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 NIPAL4Q0D2K0 466 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 NADK2Q4G0N4 442 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 MAMDC4Q6UXC1 1216 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 OR4K2Q8NGD2 314 aa19.84■□□□□ 0.77
CSPG5-201ENST00000264723 FAM162AQ96A26 154 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms