RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 GTF2IRD1Q9UHL9 959 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 ENOPH1Q9UHY7 261 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 H3BN98 237 aa14□□□□□ -0.17
CDH3-201ENST00000264012 RPL17P18621 184 aaKnown RBP14□□□□□ -0.17
CDH3-201ENST00000264012 IL1R2P27930 398 aa14□□□□□ -0.17
CDH3-201ENST00000264012 MAPKAPK2P49137 400 aa14□□□□□ -0.17
CDH3-201ENST00000264012 ZNF697Q5TEC3 545 aa14□□□□□ -0.17
CDH3-201ENST00000264012 KIAA1324Q6UXG2 1013 aaKnown RBP14□□□□□ -0.17
CDH3-201ENST00000264012 DDHD1Q8NEL9 900 aa14□□□□□ -0.17
CDH3-201ENST00000264012 CD101Q93033 1021 aa14□□□□□ -0.17
CDH3-201ENST00000264012 A0A088AWK7 358 aa14□□□□□ -0.17
CDH3-201ENST00000264012 ZNF10P21506 573 aaPredicted RBP14□□□□□ -0.17
CDH3-201ENST00000264012 NDST2P52849 883 aa14□□□□□ -0.17
CDH3-201ENST00000264012 ACLYP53396 1101 aa14□□□□□ -0.17
CDH3-201ENST00000264012 TCEA2Q15560 299 aa14□□□□□ -0.17
CDH3-201ENST00000264012 INTS11Q5TA45 600 aaKnown RBP14□□□□□ -0.17
CDH3-201ENST00000264012 CASP12Q6UXS9 341 aa14□□□□□ -0.17
CDH3-201ENST00000264012 KIAA0408Q6ZU52 694 aa14□□□□□ -0.17
CDH3-201ENST00000264012 FBXW8Q8N3Y1 598 aa14□□□□□ -0.17
CDH3-201ENST00000264012 GPR156Q8NFN8 814 aa14□□□□□ -0.17
CDH3-201ENST00000264012 SLC35B2Q8TB61 432 aa14□□□□□ -0.17
CDH3-201ENST00000264012 FUBP3Q96I24 572 aaKnown RBP eCLIP14□□□□□ -0.17
CDH3-201ENST00000264012 C7orf26Q96N11 449 aa14□□□□□ -0.17
CDH3-201ENST00000264012 SLC4A5Q9BY07 1137 aa14□□□□□ -0.17
CDH3-201ENST00000264012 TBC1D14Q9P2M4 693 aa14□□□□□ -0.17
CDH3-201ENST00000264012 ARIH1Q9Y4X5 557 aaPredicted RBP14□□□□□ -0.17
CDH3-201ENST00000264012 ZFP37Q9Y6Q3 630 aaPredicted RBP14□□□□□ -0.17
CDH3-201ENST00000264012 GLYATL1P3A0A0U1RQE8 302 aa14□□□□□ -0.17
CDH3-201ENST00000264012 NPEPPSL1A6NEC2 478 aa14□□□□□ -0.17
CDH3-201ENST00000264012 CCL22O00626 93 aa14□□□□□ -0.17
CDH3-201ENST00000264012 NTSP30990 170 aa14□□□□□ -0.17
CDH3-201ENST00000264012 SOX6P35712 828 aa14□□□□□ -0.17
CDH3-201ENST00000264012 POLD2P49005 469 aa14□□□□□ -0.17
CDH3-201ENST00000264012 NEDD8Q15843 81 aa14□□□□□ -0.17
CDH3-201ENST00000264012 CDCA2Q69YH5 1023 aaPredicted RBP14□□□□□ -0.17
CDH3-201ENST00000264012 ESRP1Q6NXG1 681 aaKnown RBP14□□□□□ -0.17
CDH3-201ENST00000264012 ZDHHC24Q6UX98 284 aa14□□□□□ -0.17
CDH3-201ENST00000264012 DHDDSQ86SQ9 333 aa14□□□□□ -0.17
CDH3-201ENST00000264012 CRYBG2Q8N1P7 616 aa14□□□□□ -0.17
CDH3-201ENST00000264012 MAGEB10Q96LZ2 347 aaPredicted RBP14□□□□□ -0.17
CDH3-201ENST00000264012 TEKT5Q96M29 485 aa14□□□□□ -0.17
CDH3-201ENST00000264012 PCDH12Q9NPG4 1184 aa14□□□□□ -0.17
CDH3-201ENST00000264012 SLC45A1Q9Y2W3 748 aa14□□□□□ -0.17
CDH3-201ENST00000264012 TOPAZ1Q8N9V7 1692 aa14□□□□□ -0.17
CDH3-201ENST00000264012 PTGES3LE9PB15 166 aa14□□□□□ -0.17
CDH3-201ENST00000264012 TMEM63AO94886 807 aa14□□□□□ -0.17
CDH3-201ENST00000264012 CTSEP14091 401 aa14□□□□□ -0.17
CDH3-201ENST00000264012 DCAF12L1Q5VU92 463 aa14□□□□□ -0.17
CDH3-201ENST00000264012 SYPL2Q5VXT5 272 aa14□□□□□ -0.17
CDH3-201ENST00000264012 ZNF549Q6P9A3 640 aa14□□□□□ -0.17
CDH3-201ENST00000264012 CYP4Z2PQ8N1L4 340 aa14□□□□□ -0.17
CDH3-201ENST00000264012 CMASQ8NFW8 434 aaPredicted RBP14□□□□□ -0.17
CDH3-201ENST00000264012 PSMG2Q969U7 264 aa14□□□□□ -0.17
CDH3-201ENST00000264012 PSME2Q9UL46 239 aa14□□□□□ -0.17
CDH3-201ENST00000264012 PCDHB1Q9Y5F3 818 aa14□□□□□ -0.17
CDH3-201ENST00000264012 PCDHGC4Q9Y5F7 938 aa14□□□□□ -0.17
CDH3-201ENST00000264012 MYH2Q9UKX2 1941 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 PPEF2O14830 753 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 FGF19O95750 216 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 NMBRP28336 390 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.99□□□□□ -0.17
CDH3-201ENST00000264012 TRIM16LQ309B1 348 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 TMEM110Q86TL2 294 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 GPR180Q86V85 440 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 ECHDC2Q86YB7 292 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 ZFRQ96KR1 1074 aaKnown RBP13.99□□□□□ -0.17
CDH3-201ENST00000264012 TRAPPC9Q96Q05 1148 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 ACSS2Q9NR19 701 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 CACNG4Q9UBN1 327 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 ASF1AQ9Y294 204 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 CCL16O15467 120 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 TGDSO95455 350 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 CLTBP09497 229 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 MRPL28Q13084 256 aaKnown RBP13.99□□□□□ -0.17
CDH3-201ENST00000264012 FSTL4Q6MZW2 842 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 PRSS55Q6UWB4 352 aaPredicted RBP13.99□□□□□ -0.17
CDH3-201ENST00000264012 MAGEE2Q8TD90 523 aaPredicted RBP13.99□□□□□ -0.17
CDH3-201ENST00000264012 IGSF9Q9P2J2 1179 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 PRPF19Q9UMS4 504 aaKnown RBP13.99□□□□□ -0.17
CDH3-201ENST00000264012 ZNF142P52746 1687 aaPredicted RBP13.99□□□□□ -0.17
CDH3-201ENST00000264012 C2orf71A6NGG8 1288 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 SERPINI2O75830 405 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 ANPEPP15144 967 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 PRKAG1P54619 331 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 SPIDRQ14159 915 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 DLG2Q15700 870 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 TIGD2Q4W5G0 525 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 TXNRD3NBQ6F5E7 133 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 ISLR2Q6UXK2 745 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 UBE2R2Q712K3 238 aaPredicted RBP13.99□□□□□ -0.17
CDH3-201ENST00000264012 USP7Q93009 1102 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 TIFAQ96CG3 184 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 GPR21Q99679 349 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 SSU72Q9NP77 194 aaKnown RBP13.99□□□□□ -0.17
CDH3-201ENST00000264012 NDOR1Q9UHB4 597 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 TPRKBQ9Y3C4 175 aa13.99□□□□□ -0.17
CDH3-201ENST00000264012 PLIN3O60664 434 aa13.98□□□□□ -0.17
CDH3-201ENST00000264012 TCF4P15884 667 aa13.98□□□□□ -0.17
CDH3-201ENST00000264012 HNF4AP41235 474 aa13.98□□□□□ -0.17
CDH3-201ENST00000264012 SLC7A2P52569 658 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms