RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 DNAAF2Q9NVR5 837 aaKnown RBP13.61□□□□□ -0.23
VMP1-201ENST00000262291 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.61□□□□□ -0.238e-8■□□□□ 9.4
VMP1-201ENST00000262291 OXSMQ9NWU1 459 aa13.61□□□□□ -0.23
VMP1-201ENST00000262291 UBA6A0AVT1 1052 aaPredicted RBP13.6□□□□□ -0.23
VMP1-201ENST00000262291 E9PBE3 544 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 NVLO15381 856 aaKnown RBP13.6□□□□□ -0.23
VMP1-201ENST00000262291 CD3EAPO15446 510 aaKnown RBP13.6□□□□□ -0.23
VMP1-201ENST00000262291 SMAD6O43541 496 aaKnown RBP13.6□□□□□ -0.23
VMP1-201ENST00000262291 KLHL41O60662 606 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 RFPL2O75678 378 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 FGF1P05230 155 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 C8AP07357 584 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 ACADSP16219 412 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 TSPAN8P19075 237 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 NCF2P19878 526 aaPredicted RBP13.6□□□□□ -0.23
VMP1-201ENST00000262291 GRK2P25098 689 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 RFC2P35250 354 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 TRAF2Q12933 501 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 ARL13AQ5H913 290 aaPredicted RBP13.6□□□□□ -0.23
VMP1-201ENST00000262291 ZNF549Q6P9A3 640 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 ZYG11AQ6WRX3 759 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 HERC6Q8IVU3 1022 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 TDRD5Q8NAT2 981 aaKnown RBP13.6□□□□□ -0.23
VMP1-201ENST00000262291 TXNDC5Q8NBS9 432 aaKnown RBP13.6□□□□□ -0.23
VMP1-201ENST00000262291 CHD5Q8TDI0 1954 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 PHF21BQ96EK2 531 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 FEM1AQ9BSK4 669 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 ZBP1Q9H171 429 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 DENND2DQ9H6A0 471 aaPredicted RBP13.6□□□□□ -0.23
VMP1-201ENST00000262291 WDR55Q9H6Y2 383 aaPredicted RBP13.6□□□□□ -0.23
VMP1-201ENST00000262291 TSR3Q9UJK0 312 aaKnown RBP13.6□□□□□ -0.23
VMP1-201ENST00000262291 LILRB3O75022 631 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 SIN3BO75182 1162 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 WFS1O76024 890 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 PIGNO95427 931 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 PRAMEF12O95522 483 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 LRG1P02750 347 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 UBTFL6P0CB48 400 aaPredicted RBP13.6□□□□□ -0.23
VMP1-201ENST00000262291 ZCCHC18P0CG32 403 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 HNRNPLP14866 589 aaKnown RBP eCLIP13.6□□□□□ -0.231e-7■■■■□ 23.2
VMP1-201ENST00000262291 HLA-DPA1P20036 260 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 TUBB3Q13509 450 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 MYBPC3Q14896 1274 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 GLT6D1Q7Z4J2 308 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.6□□□□□ -0.23
VMP1-201ENST00000262291 FIBCD1Q8N539 461 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 PAF1Q8N7H5 531 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 STYXQ8WUJ0 223 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 MYLIPQ8WY64 445 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 BADQ92934 168 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 TCEAL4Q96EI5 215 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 PLEKHG4BQ96PX9 1271 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 RANBP9Q96S59 729 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 MMADHCQ9H3L0 296 aaPredicted RBP13.6□□□□□ -0.23
VMP1-201ENST00000262291 MFSD1Q9H3U5 465 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 COG4Q9H9E3 785 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 VPS51Q9UID3 782 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 CCL26Q9Y258 94 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 ANKRD6Q9Y2G4 727 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 TBC1D30Q9Y2I9 924 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 VWA7Q9Y334 891 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 PTPRSQ13332 1948 aa13.6□□□□□ -0.23
VMP1-201ENST00000262291 ZMPSTE24O75844 475 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 KLHL2O95198 593 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 GLP2RO95838 553 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 JUNP05412 331 aaKnown RBP13.59□□□□□ -0.23
VMP1-201ENST00000262291 CCR2P41597 374 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 SKIV2L2P42285 1042 aaKnown RBP13.59□□□□□ -0.23
VMP1-201ENST00000262291 MAGEA10P43363 369 aaPredicted RBP13.59□□□□□ -0.23
VMP1-201ENST00000262291 LEPRP48357 1165 aaKnown RBP13.59□□□□□ -0.23
VMP1-201ENST00000262291 KCNC1P48547 511 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 CCDC6Q16204 474 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 FBXO48Q5FWF7 155 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 CFAP157Q5JU67 520 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 ZNF697Q5TEC3 545 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 MYLK4Q86YV6 388 aaPredicted RBP13.59□□□□□ -0.23
VMP1-201ENST00000262291 ST13P5Q8NFI4 369 aaPredicted RBP13.59□□□□□ -0.23
VMP1-201ENST00000262291 BRSK1Q8TDC3 778 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 RPL10LQ96L21 214 aaKnown RBP13.59□□□□□ -0.23
VMP1-201ENST00000262291 ZNF599Q96NL3 588 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 TCF25Q9BQ70 676 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 CADM1Q9BY67 442 aaKnown RBP13.59□□□□□ -0.23
VMP1-201ENST00000262291 TNKS2Q9H2K2 1166 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 RHBDL2Q9NX52 303 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 GALNT8Q9NY28 637 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 ANKRD36A6QL64 1941 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 ZNF195O14628 629 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 SLC7A4O43246 635 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 ALPIP09923 528 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 LINC00271P0C7V0 271 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 SYN1P17600 705 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 CR2P20023 1033 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 PTPN4P29074 926 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 CRABP2P29373 138 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 PMLP29590 882 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 RHOAP61586 193 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 POU4F1Q01851 419 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 TNK2Q07912 1038 aa13.59□□□□□ -0.23
VMP1-201ENST00000262291 SETD3Q86TU7 594 aaPredicted RBP13.59□□□□□ -0.23
VMP1-201ENST00000262291 OR6Y1Q8NGX8 325 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms