RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 REXO5Q96IC2 774 aaKnown RBP8.34□□□□□ -1.07
SNCAIP-201ENST00000261367 SLC38A2Q96QD8 506 aa8.34□□□□□ -1.07
SNCAIP-201ENST00000261367 MTMR9Q96QG7 549 aa8.34□□□□□ -1.07
SNCAIP-201ENST00000261367 PLA2G4CQ9UP65 541 aa8.34□□□□□ -1.07
SNCAIP-201ENST00000261367 RIMBP2O15034 1052 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 METTL18O95568 372 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 ENDOUP21128 410 aaKnown RBP8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 MATN1P21941 496 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 MGAT1P26572 445 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 GSTM2P28161 218 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 S100A2P29034 98 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 S100A3P33764 101 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 SREBF1P36956 1147 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 AVPR1AP37288 418 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 RPL3P39023 403 aaKnown RBP8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 NAGLUP54802 743 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 AP1S2P56377 157 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 IL18Q14116 193 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 GRM2Q14416 872 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 HIST2H2ACQ16777 129 aaPredicted RBP8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 TBRG1Q3YBR2 411 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 USP39Q53GS9 565 aaKnown RBP8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 RC3H1Q5TC82 1133 aaKnown RBP8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 HIST2H2AA3Q6FI13 130 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 SLC30A10Q6XR72 485 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 TTC29Q8NA56 475 aaPredicted RBP8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 FLAD1Q8NFF5 587 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 TRPM4Q8TD43 1214 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 NSUN4Q96CB9 384 aaKnown RBP8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 ERLEC1Q96DZ1 483 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 ZNF670Q9BS34 389 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 RAVER2Q9HCJ3 691 aaKnown RBP8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 JPH1Q9HDC5 661 aaPredicted RBP8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 SNX15Q9NRS6 342 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 VPS28Q9UK41 221 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 NCKAP1Q9Y2A7 1128 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 PGRMC2O15173 223 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 ACOX3O15254 700 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 CD36P16671 472 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 NELFEP18615 380 aaKnown RBP8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 FGFR2P21802 821 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 MYF6P23409 242 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 PCID2Q5JVF3 399 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 COLEC12Q5KU26 742 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 XKR5Q6UX68 686 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 SCML4Q8N228 414 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 RAB42Q8N4Z0 105 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 TMEM199Q8N511 208 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 FBXO30Q8TB52 745 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 ACOT12Q8WYK0 555 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 POP1Q99575 1024 aaKnown RBP8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 NPAS2Q99743 824 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 SARS2Q9NP81 518 aaKnown RBP8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 A0A0J9YYE9 177 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 SLC22A3O75751 556 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 BBOX1O75936 387 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 NUDT1P36639 197 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 NDST1P52848 882 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 TXNL4AP83876 142 aaKnown RBP8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 NFATC3Q12968 1075 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 ANKRD26P1Q6NSI1 321 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 UGT2A3Q6UWM9 527 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 ZNF34Q8IZ26 560 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 LZTR1Q8N653 840 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 LSM14AQ8ND56 463 aaKnown RBP8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 IPMKQ8NFU5 416 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 PTCD2Q8WV60 388 aaKnown RBP8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 TCEAL4Q96EI5 215 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 SLC4A9Q96Q91 983 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 KCNN2Q9H2S1 579 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 CUEDC1Q9NWM3 386 aaPredicted RBP8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 AP4E1Q9UPM8 1137 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 DOT1LQ8TEK3 1739 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 AP3D1O14617 1153 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 GLP2RO95838 553 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 CYP11A1P05108 521 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 POU1F1P28069 291 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 EPHA3P29320 983 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 HTR2BP41595 481 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 GRIA1P42261 906 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 ALDH3A2P51648 485 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 ATP12AP54707 1039 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 SLC12A3P55017 1021 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 S100A12P80511 92 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 LRRC74AQ0VAA2 488 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 TLR1Q15399 786 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 BTBD16Q32M84 506 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 GLYATQ6IB77 296 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 TIFABQ6ZNK6 161 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 AMIGO1Q86WK6 493 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 TICAM1Q8IUC6 712 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 OR2T12Q8NG77 320 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 SPPL2AQ8TCT8 520 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 SPOCK2Q92563 424 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 C8orf48Q96LL4 319 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 CCDC106Q9BWC9 280 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 ALG2Q9H553 416 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 USP29Q9HBJ7 922 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 ZNF304Q9HCX3 659 aa8.33□□□□□ -1.08
SNCAIP-201ENST00000261367 PCDHB16Q9NRJ7 776 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms