RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 RPL9P32969 192 aaKnown RBP12.11□□□□□ -0.47
COL8A1-201ENST00000261037 PTPN5P54829 565 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 GPR158Q5T848 1215 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 BROXQ5VW32 411 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 CCDC185Q8N715 623 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 P2RY11Q96G91 374 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 TBC1D10AQ9BXI6 508 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 FTHL17Q9BXU8 183 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 PCDH18Q9HCL0 1135 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 SLCO1B3Q9NPD5 702 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 KLF15Q9UIH9 416 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 CORO2BQ9UQ03 480 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 C2CD2Q9Y426 696 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 PNMA8CA0A1B0GUJ8 204 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 IQCF5A8MTL0 148 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 MCIDASD6RGH6 385 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 LIN7AO14910 233 aaPredicted RBP12.11□□□□□ -0.47
COL8A1-201ENST00000261037 MMP3P08254 477 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 HOXC6P09630 235 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 ARF4P18085 180 aaPredicted RBP12.11□□□□□ -0.47
COL8A1-201ENST00000261037 MPSTP25325 297 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 HTR1BP28222 390 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 RBBP4Q09028 425 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 ALG11Q2TAA5 492 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 FUKQ8N0W3 1084 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 OR7A2PQ8NGA2 310 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 TEX47Q8TBZ9 253 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 DEFB118Q96PH6 123 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 PCDHB18PQ96TA0 734 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 SLC39A8Q9C0K1 460 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 CERS4Q9HA82 394 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 MAPK8P45983 427 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 WNT3AP56704 352 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 FBXO48Q5FWF7 155 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 MTX3Q5HYI7 312 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 PSRC1Q6PGN9 363 aaPredicted RBP12.11□□□□□ -0.47
COL8A1-201ENST00000261037 LINGO4Q6UY18 593 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.11□□□□□ -0.47
COL8A1-201ENST00000261037 GALNT5Q7Z7M9 940 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 CDH24Q86UP0 819 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 PPCDCQ96CD2 204 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 QKIQ96PU8 341 aaKnown RBP eCLIP12.11□□□□□ -0.47
COL8A1-201ENST00000261037 ZNF446Q9NWS9 450 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 GPN3Q9UHW5 284 aaPredicted RBP12.11□□□□□ -0.47
COL8A1-201ENST00000261037 AP3M1Q9Y2T2 418 aa12.11□□□□□ -0.47
COL8A1-201ENST00000261037 SEC13P55735 322 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 RFX4Q33E94 735 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 RFWD3Q6PCD5 774 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 TXNDC11Q6PKC3 985 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 ABRAXAS1Q6UWZ7 409 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 DHDDSQ86SQ9 333 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 GPR180Q86V85 440 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 TOP6BLQ8N6T0 577 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 SHC3Q92529 594 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 CD101Q93033 1021 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 MYDGFQ969H8 173 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 PDCD10Q9BUL8 212 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 AGO3Q9H9G7 860 aaKnown RBP12.1□□□□□ -0.47
COL8A1-201ENST00000261037 ERVK-5Q9HDB9 667 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 UNC5CO95185 931 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 DNTTP04053 509 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 AQP1P29972 269 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 HOXA10P31260 410 aaPredicted RBP12.1□□□□□ -0.47
COL8A1-201ENST00000261037 TCEAL5Q5H9L2 206 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 FKBP1CQ5VVH2 108 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 DUPD1Q68J44 220 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 LDB1Q86U70 411 aaPredicted RBP12.1□□□□□ -0.47
COL8A1-201ENST00000261037 FAM129CQ86XR2 697 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 PSMA8Q8TAA3 256 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 SLC4A9Q96Q91 983 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 SPATA5L1Q9BVQ7 753 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 TNKS2Q9H2K2 1166 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 SLC35C2Q9NQQ7 365 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 U3KQV3 271 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.1□□□□□ -0.47
COL8A1-201ENST00000261037 AP3D1O14617 1153 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 SSNA1O43805 119 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 FKTNO75072 461 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 SNUPNO95149 360 aaKnown RBP12.1□□□□□ -0.47
COL8A1-201ENST00000261037 ABHD2P08910 425 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 PDK4Q16654 411 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 MPPE1Q53F39 396 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 B3GNT6Q6ZMB0 384 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 CIR1Q86X95 450 aaPredicted RBP12.1□□□□□ -0.47
COL8A1-201ENST00000261037 FEM1CQ96JP0 617 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 TMEM138Q9NPI0 162 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 GULP1Q9UBP9 304 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 ZNF490Q9ULM2 529 aaPredicted RBP12.1□□□□□ -0.47
COL8A1-201ENST00000261037 CLEC4AQ9UMR7 237 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 URADA6NGE7 173 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 MFSD11O43934 449 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 MGRN1O60291 552 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 ITGA2P17301 1181 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 ADSSP30520 456 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 ADAMTSL2Q86TH1 951 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 CUZD1Q86UP6 607 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 XYLT1Q86Y38 959 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 RP9Q8TA86 221 aaKnown RBP12.1□□□□□ -0.47
COL8A1-201ENST00000261037 LENG1Q96BZ8 264 aaPredicted RBP12.1□□□□□ -0.47
COL8A1-201ENST00000261037 RNPEPL1Q9HAU8 725 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms