RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 C1SP09871 688 aa15.81■□□□□ 0.12
CCDC90B-201ENST00000260054 ELFN1P0C7U0 828 aa15.81■□□□□ 0.12
CCDC90B-201ENST00000260054 ZNF30P17039 623 aa15.81■□□□□ 0.12
CCDC90B-201ENST00000260054 MCM3P25205 808 aa15.81■□□□□ 0.12
CCDC90B-201ENST00000260054 HOXA6P31267 233 aa15.81■□□□□ 0.12
CCDC90B-201ENST00000260054 HMGCLP35914 325 aa15.81■□□□□ 0.12
CCDC90B-201ENST00000260054 LIG3P49916 1009 aa15.81■□□□□ 0.12
CCDC90B-201ENST00000260054 ZNF140P52738 457 aaPredicted RBP15.81■□□□□ 0.12
CCDC90B-201ENST00000260054 ARHGEF7Q14155 803 aa15.81■□□□□ 0.12
CCDC90B-201ENST00000260054 CES3Q6UWW8 571 aa15.81■□□□□ 0.12
CCDC90B-201ENST00000260054 CBARPQ8N350 705 aaPredicted RBP15.81■□□□□ 0.12
CCDC90B-201ENST00000260054 FAM160A2Q8N612 972 aaPredicted RBP15.81■□□□□ 0.12
CCDC90B-201ENST00000260054 OR13C4Q8NGS5 318 aa15.81■□□□□ 0.12
CCDC90B-201ENST00000260054 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.81■□□□□ 0.12
CCDC90B-201ENST00000260054 STAMBPL1Q96FJ0 436 aa15.81■□□□□ 0.12
CCDC90B-201ENST00000260054 PLAC1Q9HBJ0 212 aa15.81■□□□□ 0.12
CCDC90B-201ENST00000260054 SAMD15Q9P1V8 674 aa15.81■□□□□ 0.12
CCDC90B-201ENST00000260054 SLC2A6Q9UGQ3 507 aa15.81■□□□□ 0.12
CCDC90B-201ENST00000260054 IGHV1OR15-9A0A0B4J2B8 117 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 PRR23AA6NEV1 266 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 FAM47DPA6NHR8 397 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 GOLGA8CPA6NN73 597 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 C2orf81A6NN90 581 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 H0Y858 1186 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 TSPAN6O43657 245 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 MMP20O60882 483 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 PCDH8O95206 1070 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 TUBBP07437 444 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 GM2AP17900 193 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 LPOP22079 712 aaPredicted RBP15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 NMBRP28336 390 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 STC1P52823 247 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 MAP7D1Q3KQU3 841 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 TSTD2Q5T7W7 516 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 RFLNAQ6ZTI6 216 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 HSD11B1LQ7Z5J1 315 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 CXorf40AQ8TE69 158 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 PTCD2Q8WV60 388 aaKnown RBP15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 MFSD3Q96ES6 412 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 TOE1Q96GM8 510 aaKnown RBP15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 C9orf72Q96LT7 481 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 TSPYL1Q9H0U9 437 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 SGK2Q9HBY8 427 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 MRM3Q9HC36 420 aaKnown RBP15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 PREBQ9HCU5 417 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 BPIFA1Q9NP55 256 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 WSB2Q9NYS7 404 aaPredicted RBP15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 IL17CQ9P0M4 197 aa15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 ZFR2Q9UPR6 939 aaKnown RBP15.8■□□□□ 0.12
CCDC90B-201ENST00000260054 TBC1D3DA0A087WVF3 549 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 TBC1D3IA0A087WXS9 549 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 TBC1D3EA0A087X179 549 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 TBC1D3KA0A087X1G2 549 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 MAGEB16A2A368 324 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 TBC1D3FA6NER0 549 aaPredicted RBP15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 TBC1D3LB9A6J9 549 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 TBC1D3HP0C7X1 549 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 C6P13671 934 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 PGAM1P18669 254 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 CD6P30203 668 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 MAGEA4P43358 317 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 CSTF1Q05048 431 aaKnown RBP15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 SEL1L3Q68CR1 1132 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 TBC1D3GQ6DHY5 549 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 TBC1D3CQ6IPX1 549 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 MICALCLQ6ZW33 695 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 TMEM135Q86UB9 458 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 RELL1Q8IUW5 271 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 TBC1D3Q8IZP1 549 aaPredicted RBP15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 OR4K2Q8NGD2 314 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 OR13J1Q8NGT2 312 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 AENQ8WTP8 325 aaKnown RBP15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 PYROXD1Q8WU10 500 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 DNAJC1Q96KC8 554 aaKnown RBP15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 KDM4CQ9H3R0 1056 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 TREX1Q9NSU2 369 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 ZC3H7BQ9UGR2 993 aaKnown RBP15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 INVSQ9Y283 1065 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 COQ6Q9Y2Z9 468 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 BPTFQ12830 3046 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 FAM237BA0A1B0GVD1 139 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 IGLON5A6NGN9 336 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 PSMD11O00231 422 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 CCL22O00626 93 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 STX7O15400 261 aaKnown RBP15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 SLC34A2O95436 690 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 SEMA4FO95754 770 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 OXTRP30559 389 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 ETV3P41162 512 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 FNTBP49356 437 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 ARSDP51689 593 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 PPP2CBP62714 309 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 PPP2CAP67775 309 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 TMPRSS15P98073 1019 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 PDE1BQ01064 536 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 LAMB3Q13751 1172 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 ANKRD20A4Q4UJ75 823 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 UBAP2Q5T6F2 1119 aaKnown RBP15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 ARMC3Q5W041 872 aa15.79■□□□□ 0.12
CCDC90B-201ENST00000260054 ESRP1Q6NXG1 681 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms