RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 COPZ1P61923 177 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 NSUN2Q08J23 767 aaKnown RBP eCLIP11.67□□□□□ -0.54
VRTN-201ENST00000256362 FAM214AQ32MH5 1076 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 OTUD1Q5VV17 481 aaPredicted RBP11.67□□□□□ -0.54
VRTN-201ENST00000256362 SLC22A16Q86VW1 577 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 MICU2Q8IYU8 434 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 LZTR1Q8N653 840 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 PAF1Q8N7H5 531 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 PCYOX1LQ8NBM8 494 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 OR10Q1Q8NGQ4 319 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 HASPINQ8TF76 798 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 SLC35B4Q969S0 331 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 MUS81Q96NY9 551 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 HNRNPABQ99729 332 aaKnown RBP11.67□□□□□ -0.54
VRTN-201ENST00000256362 UNC93B1Q9H1C4 597 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 VRTNQ9H8Y1 702 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 CACNA2D2Q9NY47 1150 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 SEPT3Q9UH03 358 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 DLX3O60479 287 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 DEAF1O75398 565 aaPredicted RBP11.67□□□□□ -0.54
VRTN-201ENST00000256362 AHSGP02765 367 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 KRT8P05787 483 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 HSPA1AP0DMV8 641 aaKnown RBP11.67□□□□□ -0.54
VRTN-201ENST00000256362 HSPA1BP0DMV9 641 aaKnown RBP11.67□□□□□ -0.54
VRTN-201ENST00000256362 STMN1P16949 149 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 PRDX6P30041 224 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 IST1P53990 364 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 CACNB2Q08289 660 aaPredicted RBP11.67□□□□□ -0.54
VRTN-201ENST00000256362 MAPRE2Q15555 327 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 RABL3Q5HYI8 236 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 PRAMEF19Q5SWL8 479 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 IQSEC1Q6DN90 963 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 HMBOX1Q6NT76 420 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 NIPAL1Q6NVV3 410 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 PLD3Q8IV08 490 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 FBXO30Q8TB52 745 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 NSMCE3Q96MG7 304 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 TMEM74Q96NL1 305 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 BIRC8Q96P09 236 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 PLEKHA5Q9HAU0 1116 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 OXSMQ9NWU1 459 aa11.67□□□□□ -0.54
VRTN-201ENST00000256362 SMIM28A0A1B0GU29 152 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 TRPC5OSA6NMA1 111 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 CHEK2O96017 543 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 LDLRP01130 860 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 PABPC1P11940 636 aaKnown RBP11.66□□□□□ -0.54
VRTN-201ENST00000256362 MLNP12872 115 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 YBX3P16989 372 aaKnown RBP eCLIP11.66□□□□□ -0.54
VRTN-201ENST00000256362 SLC7A1P30825 629 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 AFF1P51825 1210 aaKnown RBP11.66□□□□□ -0.54
VRTN-201ENST00000256362 LAPTM5Q13571 262 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 ZNF470Q6ECI4 717 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 C4orf22Q6V702 233 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 PAGE2Q7Z2X7 111 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 CARM1Q86X55 608 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 DNAJB3Q8WWF6 145 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 TRIM15Q9C019 465 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 PCDHGA3Q9Y5H0 932 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 GSTA4O15217 222 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 TBX1O43435 398 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 AP2A1O95782 977 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 ALOX12P18054 663 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 GLDCP23378 1020 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 GABRB3P28472 473 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 ZNF484Q5JVG2 852 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 CENPIQ92674 756 aaPredicted RBP11.66□□□□□ -0.54
VRTN-201ENST00000256362 C9orf16Q9BUW7 83 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 FICDQ9BVA6 458 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 RNF38Q9H0F5 515 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 TKTL2Q9H0I9 626 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 HMG20AQ9NP66 347 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 TNFRSF12AQ9NP84 129 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 MRPL40Q9NQ50 206 aaKnown RBP11.66□□□□□ -0.54
VRTN-201ENST00000256362 STAP1Q9ULZ2 295 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 CLDN25C9JDP6 229 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 TIMM44O43615 452 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 ADRA1BP35368 520 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 GRM5P41594 1212 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 RPS9P46781 194 aaKnown RBP11.66□□□□□ -0.54
VRTN-201ENST00000256362 ALDH3B2P48448 385 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 IL5RAQ01344 420 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 MAPRE1Q15691 268 aaKnown RBP11.66□□□□□ -0.54
VRTN-201ENST00000256362 MOGQ16653 247 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 CNSTQ6PJW8 725 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 ABI1Q8IZP0 508 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 OR7A2PQ8NGA2 310 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 HM13Q8TCT9 377 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 TMEM40Q8WWA1 233 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 WNT8BQ93098 351 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 ITCHQ96J02 903 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 SNX27Q96L92 541 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 ZNF597Q96LX8 424 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 KCTD14Q9BQ13 255 aaPredicted RBP11.66□□□□□ -0.54
VRTN-201ENST00000256362 TBCDQ9BTW9 1192 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 REXO4Q9GZR2 422 aaKnown RBP11.66□□□□□ -0.54
VRTN-201ENST00000256362 TOR3AQ9H497 397 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 ALG9Q9H6U8 611 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 TBC1D13Q9NVG8 400 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 OR12D3Q9UGF7 316 aa11.66□□□□□ -0.54
VRTN-201ENST00000256362 USP22Q9UPT9 525 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms