RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 GJA9P57773 515 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 KRR1Q13601 381 aaKnown RBP18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 GPR180Q86V85 440 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 COL20A1Q9P218 1284 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 VPS4AQ9UN37 437 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 IL6P05231 212 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 DUSP28Q4G0W2 176 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 NKX2-3Q8TAU0 364 aa18.71■□□□□ 0.59
SMARCC1-201ENST00000254480 OR2AG2A6NM03 316 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 SNPHO15079 494 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 PDK4Q16654 411 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 DGUOKQ16854 277 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 AKIRIN2Q53H80 203 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 INTS11Q5TA45 600 aaKnown RBP18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 MOSPD2Q8NHP6 518 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 RAP2CQ9Y3L5 183 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 PTPRJQ12913 1337 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 C21orf59P57076 290 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 MADCAM1Q13477 382 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 FASTKD3Q14CZ7 662 aaKnown RBP18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 KIAA0408Q6ZU52 694 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 LRRC4CQ9HCJ2 640 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 SLC28A1O00337 649 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 HOXB8P17481 243 aaPredicted RBP18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 CXCR3P49682 368 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 CDC42P60953 191 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 NOGQ13253 232 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 CCDC185Q8N715 623 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 SGK2Q9HBY8 427 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 GLOD4Q9HC38 313 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 SAMHD1Q9Y3Z3 626 aaKnown RBP18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 ABHD14A-ACY1A0A1B0GW23 586 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 PMF1Q6P1K2 205 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 FAM171BQ6P995 826 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 C15orf52Q6ZUT6 534 aaKnown RBP18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 ADGRG2Q8IZP9 1017 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 LRRC52Q8N7C0 313 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 NLGN2Q8NFZ4 835 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 CRISPLD1Q9H336 500 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 SYNPO2Q9UMS6 1093 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 GPR25O00155 361 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 HDAC3O15379 428 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 PTDSS1P48651 473 aaKnown RBP18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 UBE2E3Q969T4 207 aa18.7■□□□□ 0.58
SMARCC1-201ENST00000254480 PRR5-ARHGAP8B1AHC4 643 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 FSCN2O14926 492 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 UNC5CO95185 931 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 CCNYL3P0C7X3 344 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 GLUD2P49448 558 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 ARHGAP8P85298 464 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 RHAGQ02094 409 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 PRKG2Q13237 762 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 SF1Q15637 639 aaKnown RBP18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 ADAMTSL2Q86TH1 951 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 RALGPS2Q86X27 583 aaPredicted RBP18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 C4orf32Q8N8J7 132 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 MRIQ9BWK5 157 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 ATG10Q9H0Y0 220 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 ACSS3Q9H6R3 686 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 CLIC5Q9NZA1 410 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 KIAA1522Q9P206 1035 aaPredicted RBP18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 E9PAM4 449 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 SLC25A12O75746 678 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 MPP1Q00013 466 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 RGS1Q08116 209 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 TAPT1Q6NXT6 567 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 PDZD7Q9H5P4 517 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 PROSER1Q86XN7 944 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 TRIT1Q9H3H1 467 aaKnown RBP18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 MMADHCQ9H3L0 296 aaPredicted RBP18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 PSMD13Q9UNM6 376 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 PCDHGC4Q9Y5F7 938 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 KCNE2Q9Y6J6 123 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 USP2O75604 605 aaPredicted RBP18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 RNASEH2AO75792 299 aaKnown RBP18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 ITPKBP27987 946 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 ADRA1BP35368 520 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 CBX2Q14781 532 aaPredicted RBP18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 GALNT5Q7Z7M9 940 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 CAMK1DQ8IU85 385 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 RBFAQ8N0V3 343 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 RPL10LQ96L21 214 aaKnown RBP18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 AGLP35573 1532 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 MCRS1Q96EZ8 462 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 PTGFRNQ9P2B2 879 aa18.69■□□□□ 0.58
SMARCC1-201ENST00000254480 SMIM35A0A1B0GVV1 85 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 KPNA5O15131 536 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 MAPK8P45983 427 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 SLC7A2P52569 658 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 MANFP55145 182 aaKnown RBP18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 QPCTQ16769 361 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 MTX3Q5HYI7 312 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 PAGE2Q7Z2X7 111 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 TP53INP1Q96A56 240 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 NXNL1Q96CM4 212 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 ZNF490Q9ULM2 529 aaPredicted RBP18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 FCF1Q9Y324 198 aaKnown RBP18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 RAI2Q9Y5P3 530 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 ZFP37Q9Y6Q3 630 aaPredicted RBP18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 EPHX1P07099 455 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms