RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 TM7SF2O76062 418 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 RHOBTB1O94844 696 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 CLDN7O95471 211 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 C1SP09871 688 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 ITGA8P53708 1063 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 DCDC1P59894 354 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 MRPS25P82663 173 aaKnown RBP14.11□□□□□ -0.15
VPS25-201ENST00000253794 PDE1BQ01064 536 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 CAV1Q03135 178 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 LAMB3Q13751 1172 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 FGL2Q14314 439 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 SETMARQ53H47 684 aaPredicted RBP14.11□□□□□ -0.15
VPS25-201ENST00000253794 SYCP2LQ5T4T6 812 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 PEAR1Q5VY43 1037 aaPredicted RBP14.11□□□□□ -0.15
VPS25-201ENST00000253794 NRSN1Q8IZ57 195 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 DNAAF3Q8N9W5 541 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 LRRN4CLQ8ND94 238 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 C1orf216Q8TAB5 229 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 PTCD2Q8WV60 388 aaKnown RBP14.11□□□□□ -0.15
VPS25-201ENST00000253794 DTD2Q96FN9 168 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 KLF6Q99612 283 aaPredicted RBP14.11□□□□□ -0.15
VPS25-201ENST00000253794 WRAP53Q9BUR4 548 aaKnown RBP14.11□□□□□ -0.15
VPS25-201ENST00000253794 SLC17A9Q9BYT1 436 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 PHACTR1Q9C0D0 580 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 IL22Q9GZX6 179 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 MRM3Q9HC36 420 aaKnown RBP14.11□□□□□ -0.15
VPS25-201ENST00000253794 IL17CQ9P0M4 197 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 DMGDHQ9UI17 866 aaKnown RBP14.11□□□□□ -0.15
VPS25-201ENST00000253794 SNX24Q9Y343 169 aa14.11□□□□□ -0.15
VPS25-201ENST00000253794 MYO15AQ9UKN7 3530 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 MROH6A6NGR9 719 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 AURKAO14965 403 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 LDB2O43679 373 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 RECQL5O94762 991 aaPredicted RBP14.1□□□□□ -0.15
VPS25-201ENST00000253794 CRTAMO95727 393 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 PIRTP0C851 137 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 ADRA1DP25100 572 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 CD27P26842 260 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 TEAD1P28347 426 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 HOXD12P35452 270 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 DPP6P42658 865 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 SPINT3P49223 89 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 ZNF140P52738 457 aaPredicted RBP14.1□□□□□ -0.15
VPS25-201ENST00000253794 SEMG2Q02383 582 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 DPTQ07507 201 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 CALCOCO2Q13137 446 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 ELF2Q15723 593 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 WDR45BQ5MNZ6 344 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 NLRP9Q7RTR0 991 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 GLT6D1Q7Z4J2 308 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 HSD11B1LQ7Z5J1 315 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 TMEM145Q8NBT3 493 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 BLOC1S5Q8TDH9 187 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 ART4Q93070 314 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 CENPTQ96BT3 561 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 LOXL4Q96JB6 756 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 HSPA12BQ96MM6 686 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 C1QTNF7Q9BXJ2 289 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 GPR63Q9BZJ6 419 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 TRIM31Q9BZY9 425 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 SEMA4AQ9H3S1 761 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 EBF2Q9HAK2 575 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 RAD18Q9NS91 495 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.1□□□□□ -0.15
VPS25-201ENST00000253794 BFARQ9NZS9 450 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 ANAPC5Q9UJX4 755 aa14.1□□□□□ -0.15
VPS25-201ENST00000253794 VPS13AQ96RL7 3174 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 HEATR9A2RTY3 570 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 FAM47DPA6NHR8 397 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 C2orf81A6NN90 581 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 E7ESA3 106 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 WNT9AO14904 365 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 SLU7O95391 586 aaKnown RBP14.09□□□□□ -0.15
VPS25-201ENST00000253794 LPOP22079 712 aaPredicted RBP14.09□□□□□ -0.15
VPS25-201ENST00000253794 NBL1P41271 181 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 SLC7A5Q01650 507 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 ACVR1Q04771 509 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 SGCGQ13326 291 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 SIM2Q14190 667 aaPredicted RBP14.09□□□□□ -0.15
VPS25-201ENST00000253794 PCID2Q5JVF3 399 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 CERCAMQ5T4B2 595 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 ZDHHC20Q5W0Z9 365 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 ESRP1Q6NXG1 681 aaKnown RBP14.09□□□□□ -0.15
VPS25-201ENST00000253794 ZDHHC24Q6UX98 284 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 CEP68Q76N32 757 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 TMEFF1Q8IYR6 380 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 ZCCHC9Q8N567 271 aaKnown RBP14.09□□□□□ -0.15
VPS25-201ENST00000253794 TP53I13Q8NBR0 393 aaPredicted RBP14.09□□□□□ -0.15
VPS25-201ENST00000253794 FAM174AQ8TBP5 190 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 SIGLEC10Q96LC7 697 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 PLEKHG4BQ96PX9 1271 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 KIFC1Q9BW19 673 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 FOXP3Q9BZS1 431 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 DPH5Q9H2P9 285 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 GDF3Q9NR23 364 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 FAM114A2Q9NRY5 505 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 ZDHHC18Q9NUE0 388 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 PKD2L2Q9NZM6 624 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 TCAF1Q9Y4C2 921 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms