RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 C17orf82Q86X59 251 aaPredicted RBP10.35□□□□□ -0.75
VPS50-201ENST00000251739 GKN2Q86XP6 184 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 PSTKQ8IV42 348 aaKnown RBP10.35□□□□□ -0.75
VPS50-201ENST00000251739 SFTPA2Q8IWL1 248 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 TP53INP2Q8IXH6 220 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 ANKRD20A12PQ8NF67 263 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 ATL2Q8NHH9 583 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 COQ10AQ96MF6 247 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 PSKH2Q96QS6 385 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 GFM1Q96RP9 751 aaKnown RBP10.35□□□□□ -0.75
VPS50-201ENST00000251739 DHX35Q9H5Z1 703 aaKnown RBP10.35□□□□□ -0.75
VPS50-201ENST00000251739 SEPT11Q9NVA2 429 aaKnown RBP10.35□□□□□ -0.75
VPS50-201ENST00000251739 PARVAQ9NVD7 372 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 ANO10Q9NW15 660 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 SIRPGQ9P1W8 387 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 GULP1Q9UBP9 304 aa10.35□□□□□ -0.75
VPS50-201ENST00000251739 TMX2-CTNND1H3BSU7 103 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 EFSO43281 561 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 HTRA2O43464 458 aaPredicted RBP10.34□□□□□ -0.75
VPS50-201ENST00000251739 LRCH4O75427 683 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 ZIC2O95409 532 aaPredicted RBP10.34□□□□□ -0.75
VPS50-201ENST00000251739 ELFN1P0C7U0 828 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 CTSEP14091 401 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 PNLIPP16233 465 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 PSMA2P25787 234 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 MIPP30301 263 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 SLC5A2P31639 672 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 ZNF135P52742 658 aaPredicted RBP10.34□□□□□ -0.75
VPS50-201ENST00000251739 INHBCP55103 352 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 ZFP36L1Q07352 338 aaKnown RBP10.34□□□□□ -0.75
VPS50-201ENST00000251739 LY6DQ14210 128 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 HLTFQ14527 1009 aaKnown RBP eCLIP10.34□□□□□ -0.75
VPS50-201ENST00000251739 RFTN1Q14699 578 aaPredicted RBP10.34□□□□□ -0.75
VPS50-201ENST00000251739 TAF1BQ53T94 588 aaPredicted RBP10.34□□□□□ -0.75
VPS50-201ENST00000251739 ERMARDQ5T6L9 678 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 RAB11FIP2Q7L804 512 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 RD3Q7Z3Z2 195 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 SPRED1Q7Z699 444 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 CCNJLQ8IV13 435 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 SLITRK4Q8IW52 837 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 CBARPQ8N350 705 aaPredicted RBP10.34□□□□□ -0.75
VPS50-201ENST00000251739 OR56A4Q8NGH8 313 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 POM121Q96HA1 1249 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 ZNF599Q96NL3 588 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 LGR4Q9BXB1 951 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 FOXP3Q9BZS1 431 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 LRRN3Q9H3W5 708 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 SYNDIG1Q9H7V2 258 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 EPB41L5Q9HCM4 733 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 MRPL40Q9NQ50 206 aaKnown RBP10.34□□□□□ -0.75
VPS50-201ENST00000251739 CWC15Q9P013 229 aaKnown RBP10.34□□□□□ -0.75
VPS50-201ENST00000251739 DOLKQ9UPQ8 538 aa10.34□□□□□ -0.75
VPS50-201ENST00000251739 CACNB4O00305 520 aaPredicted RBP10.33□□□□□ -0.76
VPS50-201ENST00000251739 NVLO15381 856 aaKnown RBP10.33□□□□□ -0.76
VPS50-201ENST00000251739 TEX33O43247 280 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 NUDT21O43809 227 aaKnown RBP10.33□□□□□ -0.76
VPS50-201ENST00000251739 SOCS5O75159 536 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 PALMO75781 387 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 TNFP01375 233 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 FBXO45P0C2W1 286 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 CCDC172P0C7W6 258 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 GZMAP12544 262 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 HGFP14210 728 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 GLB1P16278 677 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 KELP23276 732 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 PRKCIP41743 596 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 BCL2L1Q07817 233 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 SLC10A7Q0GE19 358 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 NR1D2Q14995 579 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 CNGA3Q16281 694 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 DPYSL2Q16555 572 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 C14orf28Q4W4Y0 310 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 CFAP58Q5T655 872 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 TMCO4Q5TGY1 634 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 KIAA1614Q5VZ46 1190 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 FOXR1Q6PIV2 292 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 CCDC81Q6ZN84 652 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 TMPRSS9Q7Z410 1059 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 ZNF438Q7Z4V0 828 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 FBXO39Q8N4B4 442 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 MED8Q96G25 268 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 TMEM74Q96NL1 305 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 MCCC1Q96RQ3 725 aaPredicted RBP10.33□□□□□ -0.76
VPS50-201ENST00000251739 CCNL2Q96S94 520 aaPredicted RBP10.33□□□□□ -0.76
VPS50-201ENST00000251739 CINPQ9BW66 212 aaPredicted RBP10.33□□□□□ -0.76
VPS50-201ENST00000251739 STRADBQ9C0K7 418 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 TMEM168Q9H0V1 697 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 WDR26Q9H7D7 661 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 SP110Q9HB58 689 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 B4GALT6Q9UBX8 382 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 PCSK1NQ9UHG2 260 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 RNF215Q9Y6U7 377 aa10.33□□□□□ -0.76
VPS50-201ENST00000251739 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.32□□□□□ -0.76
VPS50-201ENST00000251739 PRSS38A1L453 326 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 LRRC53A6NM62 1247 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 TMCO5BA8MYB1 307 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 J3QKU1 62 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 DFFAO00273 331 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 DDX3XO00571 662 aaKnown RBP eCLIP10.32□□□□□ -0.76
VPS50-201ENST00000251739 PRPSAP2O60256 369 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms