RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 C1QTNF8P60827 252 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 CYLC2Q14093 348 aaPredicted RBP15.79■□□□□ 0.12
LRFN1-201ENST00000248668 LPCAT4Q643R3 524 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 CDRT15Q96T59 188 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 TSEN34Q9BSV6 310 aaKnown RBP15.79■□□□□ 0.12
LRFN1-201ENST00000248668 RNF38Q9H0F5 515 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 MFSD1Q9H3U5 465 aa15.79■□□□□ 0.12
LRFN1-201ENST00000248668 GPR39O43194 453 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 PPARGP37231 505 aaPredicted RBP15.78■□□□□ 0.12
LRFN1-201ENST00000248668 MRPS35P82673 323 aaKnown RBP15.78■□□□□ 0.12
LRFN1-201ENST00000248668 NSUN2Q08J23 767 aaKnown RBP eCLIP15.78■□□□□ 0.12
LRFN1-201ENST00000248668 GEN1Q17RS7 908 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 FOXB2Q5VYV0 432 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 PIWIL4Q7Z3Z4 852 aaKnown RBP15.78■□□□□ 0.12
LRFN1-201ENST00000248668 SDCCAG8Q86SQ7 713 aaPredicted RBP15.78■□□□□ 0.12
LRFN1-201ENST00000248668 CUZD1Q86UP6 607 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 FAM156AQ8NDB6 213 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 OR4K2Q8NGD2 314 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 ZBED2Q9BTP6 218 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 UNC93B1Q9H1C4 597 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 FNIP2Q9P278 1114 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 PTGDR2Q9Y5Y4 395 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 H7C4K7 107 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 TBC1D4O60343 1298 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 SNAP91O60641 907 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 OXCT1P55809 520 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 BTKQ06187 659 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 RNF111Q6ZNA4 994 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 DSELQ8IZU8 1212 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 LPCAT1Q8NF37 534 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 SPATA17Q96L03 361 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 VN1R3Q9BXE9 311 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 MUC3BQ9H195 1237 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 ASB3Q9Y575 518 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 SDHDO14521 159 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 SPATA31D3P0C874 917 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 BMP1P13497 986 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 FMO4P31512 558 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 SLC11A2P49281 568 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 KPNA2P52292 529 aaKnown RBP15.78■□□□□ 0.12
LRFN1-201ENST00000248668 NME5P56597 212 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 SPATA31D4Q6ZUB0 917 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 DEFB118Q96PH6 123 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 TRPC7Q9HCX4 862 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 UBA2Q9UBT2 640 aaPredicted RBP15.78■□□□□ 0.12
LRFN1-201ENST00000248668 GIMAP2Q9UG22 337 aa15.78■□□□□ 0.12
LRFN1-201ENST00000248668 RGSL1A5PLK6 1076 aa15.77■□□□□ 0.12
LRFN1-201ENST00000248668 RHOCP08134 193 aa15.77■□□□□ 0.12
LRFN1-201ENST00000248668 THRAP10827 490 aa15.77■□□□□ 0.12
LRFN1-201ENST00000248668 CA8P35219 290 aa15.77■□□□□ 0.12
LRFN1-201ENST00000248668 MAPKAPK2P49137 400 aa15.77■□□□□ 0.12
LRFN1-201ENST00000248668 YBEYP58557 167 aaPredicted RBP15.77■□□□□ 0.12
LRFN1-201ENST00000248668 PFKPQ01813 784 aa15.77■□□□□ 0.12
LRFN1-201ENST00000248668 FBXW8Q8N3Y1 598 aa15.77■□□□□ 0.12
LRFN1-201ENST00000248668 TSPAN17Q96FV3 270 aa15.77■□□□□ 0.12
LRFN1-201ENST00000248668 RANBP9Q96S59 729 aa15.77■□□□□ 0.12
LRFN1-201ENST00000248668 RTKNQ9BST9 563 aa15.77■□□□□ 0.12
LRFN1-201ENST00000248668 PDFQ9HBH1 243 aa15.77■□□□□ 0.12
LRFN1-201ENST00000248668 S100A14Q9HCY8 104 aa15.77■□□□□ 0.12
LRFN1-201ENST00000248668 PLXNA3P51805 1871 aa15.77■□□□□ 0.12
LRFN1-201ENST00000248668 ZNF840PA6NDX5 716 aa15.77■□□□□ 0.11
LRFN1-201ENST00000248668 NCF1BA6NI72 391 aaPredicted RBP15.77■□□□□ 0.11
LRFN1-201ENST00000248668 NCF1CA8MVU1 366 aaPredicted RBP15.77■□□□□ 0.11
LRFN1-201ENST00000248668 UBXN8O00124 270 aa15.77■□□□□ 0.11
LRFN1-201ENST00000248668 UBFD1O14562 309 aaKnown RBP15.77■□□□□ 0.11
LRFN1-201ENST00000248668 ZDHHC11BP0C7U3 371 aa15.77■□□□□ 0.11
LRFN1-201ENST00000248668 NCF1P14598 390 aaPredicted RBP15.77■□□□□ 0.11
LRFN1-201ENST00000248668 RING1Q06587 406 aa15.77■□□□□ 0.11
LRFN1-201ENST00000248668 HECTD3Q5T447 861 aa15.77■□□□□ 0.11
LRFN1-201ENST00000248668 METTL21CQ5VZV1 264 aa15.77■□□□□ 0.11
LRFN1-201ENST00000248668 ISCA2Q86U28 154 aa15.77■□□□□ 0.11
LRFN1-201ENST00000248668 UBXN10Q96LJ8 280 aa15.77■□□□□ 0.11
LRFN1-201ENST00000248668 ELAC1Q9H777 363 aaKnown RBP15.77■□□□□ 0.11
LRFN1-201ENST00000248668 FBRSL1Q9HCM7 1045 aaKnown RBP15.77■□□□□ 0.11
LRFN1-201ENST00000248668 CATSPERZQ9NTU4 200 aa15.77■□□□□ 0.11
LRFN1-201ENST00000248668 CCNT2O60583 730 aaKnown RBP15.76■□□□□ 0.11
LRFN1-201ENST00000248668 ATP6V1G1O75348 118 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 FGF1P05230 155 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 THOP1P52888 689 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 PRKAA2P54646 552 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 PFKFB4Q16877 469 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 PGM2L1Q6PCE3 622 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 LAYNQ6UX15 382 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 GLT6D1Q7Z4J2 308 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 PCDH20Q8N6Y1 951 aaKnown RBP15.76■□□□□ 0.11
LRFN1-201ENST00000248668 KYQ8NBH2 561 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 OR6K2Q8NGY2 324 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 OR4L1Q8NH43 312 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 GABPB2Q8TAK5 448 aaPredicted RBP15.76■□□□□ 0.11
LRFN1-201ENST00000248668 DDX50Q9BQ39 737 aaKnown RBP15.76■□□□□ 0.11
LRFN1-201ENST00000248668 CCDC167Q9P0B6 97 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 C9JVG2 144 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 H3BMM5 538 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 PAPSS2O95340 614 aaPredicted RBP15.76■□□□□ 0.11
LRFN1-201ENST00000248668 RAG1P15918 1043 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 ACADSP16219 412 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 ART3Q13508 389 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 RNF219Q5W0B1 726 aaPredicted RBP15.76■□□□□ 0.11
LRFN1-201ENST00000248668 OR9I1Q8NGQ6 314 aa15.76■□□□□ 0.11
LRFN1-201ENST00000248668 PXYLP1Q8TE99 480 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms