RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 EBF3Q9H4W6 596 aa14.21□□□□□ -0.14
SDF2-201ENST00000247020 HPS4Q9NQG7 708 aa14.21□□□□□ -0.14
SDF2-201ENST00000247020 DEC1Q9P2X7 70 aa14.21□□□□□ -0.14
SDF2-201ENST00000247020 SLCO3A1Q9UIG8 710 aa14.21□□□□□ -0.14
SDF2-201ENST00000247020 SLC39A10Q9ULF5 831 aa14.21□□□□□ -0.14
SDF2-201ENST00000247020 A0A087X1B8 175 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 TSPAN11A1L157 253 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.2□□□□□ -0.14
SDF2-201ENST00000247020 AURKAO14965 403 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 PLIN3O60664 434 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 ECI2O75521 394 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 LAMP2P13473 410 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 PSMC3P17980 439 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 FOXN2P32314 431 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 SLC26A3P40879 764 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 ABL2P42684 1182 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 KPNA2P52292 529 aaKnown RBP14.2□□□□□ -0.14
SDF2-201ENST00000247020 SLC12A2P55011 1212 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 RUNX3Q13761 415 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 E2F5Q15329 346 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 TSNAXIP1Q2TAA8 658 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 LRIT3Q3SXY7 679 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 GKAP1Q5VSY0 366 aaPredicted RBP14.2□□□□□ -0.14
SDF2-201ENST00000247020 USP45Q70EL2 814 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 MTSS1LQ765P7 747 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 CMC1Q7Z7K0 106 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 C12orf40Q86WS4 652 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 CBARPQ8N350 705 aaPredicted RBP14.2□□□□□ -0.14
SDF2-201ENST00000247020 OR6K2Q8NGY2 324 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 ZNF75CPQ92670 426 aaPredicted RBP14.2□□□□□ -0.14
SDF2-201ENST00000247020 SCRN2Q96FV2 425 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 ATXN7L3BQ96GX2 97 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 MYADMQ96S97 322 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 ZDHHC6Q9H6R6 413 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 ZFYVE1Q9HBF4 777 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 POPDC3Q9HBV1 291 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 FBXO6Q9NRD1 293 aaPredicted RBP14.2□□□□□ -0.14
SDF2-201ENST00000247020 POLR3BQ9NW08 1133 aaPredicted RBP14.2□□□□□ -0.14
SDF2-201ENST00000247020 ELOVL2Q9NXB9 296 aa14.2□□□□□ -0.14
SDF2-201ENST00000247020 MYO9BQ13459 2157 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 PDE4DIPQ5VU43 2346 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 TBX10O75333 385 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 TTPAP49638 278 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 TMPRSS15P98073 1019 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 CDKN3Q16667 212 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 ZSCAN26Q16670 478 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 PTPRNQ16849 979 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 N4BP2L1Q5TBK1 243 aaPredicted RBP14.19□□□□□ -0.14
SDF2-201ENST00000247020 ZDHHC20Q5W0Z9 365 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 ATG16L1Q676U5 607 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 CNSTQ6PJW8 725 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 GDPD4Q6W3E5 623 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 TPRG1Q6ZUI0 275 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 Q6ZVU0 165 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 RAPH1Q70E73 1250 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 PAF1Q8N7H5 531 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 ARMC2Q8NEN0 867 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 RDH11Q8TC12 318 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.19□□□□□ -0.14
SDF2-201ENST00000247020 ELMO2Q96JJ3 720 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 MSLNLQ96KJ4 702 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 CIPCQ9C0C6 399 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 MANSC1Q9H8J5 431 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 SIRPGQ9P1W8 387 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 DKK3Q9UBP4 350 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 APPL1Q9UKG1 709 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 PLA2G4CQ9UP65 541 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 ACOT9Q9Y305 439 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 COMMD10Q9Y6G5 202 aa14.19□□□□□ -0.14
SDF2-201ENST00000247020 TRIM24O15164 1050 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 BUD23O43709 281 aaKnown RBP14.18□□□□□ -0.14
SDF2-201ENST00000247020 PROCP04070 461 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 BPGMP07738 259 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 SLC35E2BP0CK96 405 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 CD9P21926 228 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 PMLP29590 882 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 MC4RP32245 332 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 HNF1BP35680 557 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 PPARGP37231 505 aaPredicted RBP14.18□□□□□ -0.14
SDF2-201ENST00000247020 ADARP55265 1226 aaKnown RBP14.18□□□□□ -0.14
SDF2-201ENST00000247020 LYSMD3Q7Z3D4 306 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 PIGWQ7Z7B1 504 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 SLC41A1Q8IVJ1 513 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 STK40Q8N2I9 435 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 PHTF2Q8N3S3 785 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 TERB1Q8NA31 727 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 TTC8Q8TAM2 541 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 UCMAQ8WVF2 138 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 ZFYVE19Q96K21 471 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 OMDQ99983 421 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 C1QTNF1Q9BXJ1 281 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 PITPNM3Q9BZ71 974 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 SUDS3Q9H7L9 328 aaPredicted RBP14.18□□□□□ -0.14
SDF2-201ENST00000247020 CAB39LQ9H9S4 337 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 CLDND1Q9NY35 253 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 MARCH4Q9P2E8 410 aaPredicted RBP14.18□□□□□ -0.14
SDF2-201ENST00000247020 CDH22Q9UJ99 828 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 EMCNQ9ULC0 261 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 STARD13Q9Y3M8 1113 aa14.18□□□□□ -0.14
SDF2-201ENST00000247020 WASF2Q9Y6W5 498 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms