RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 SEC24CP53992 1094 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 WDR4P57081 412 aaKnown RBP18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 FNDC3BQ53EP0 1204 aaKnown RBP18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 GPATCH11Q8N954 259 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 GPR150Q8NGU9 434 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 GRIN3AQ8TCU5 1115 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 FRS2Q8WU20 508 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 FGF14Q92915 247 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 ELMO2Q96JJ3 720 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 MAGEB18Q96M61 343 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 TSNARE1Q96NA8 513 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 FAM111AQ96PZ2 611 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 SMIM14Q96QK8 99 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 MCMBPQ9BTE3 642 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 GTSE1Q9NYZ3 720 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 SLC17A7Q9P2U7 560 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 PLLPQ9Y342 182 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 BRWD1Q9NSI6 2320 aa18.75■□□□□ 0.59
TNFSF9-201ENST00000245817 C1orf232A0A0U1RR37 186 aa18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 FAM95CA0A1B0GW59 222 aa18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 VIMP08670 466 aaKnown RBP18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 NEFHP12036 1026 aa18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 SP100P23497 879 aaPredicted RBP18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 GABRB3P28472 473 aa18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 GJA4P35212 333 aa18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 HMGCLP35914 325 aa18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 LTBRP36941 435 aa18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 PDE1CQ14123 709 aaPredicted RBP18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 COL19A1Q14993 1142 aa18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 PTPRNQ16849 979 aa18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 GAB4Q2WGN9 574 aa18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 ITPRIPL2Q3MIP1 535 aa18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 TAF1BQ53T94 588 aaPredicted RBP18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 CPLX4Q7Z7G2 160 aa18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 TTC30BQ8N4P2 665 aa18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 CHST14Q8NCH0 376 aa18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 SMRP1Q8NCR6 262 aa18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 ISL2Q96A47 359 aa18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 BPIFA1Q9NP55 256 aa18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 POLR3BQ9NW08 1133 aaPredicted RBP18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 IL36AQ9UHA7 158 aa18.74■□□□□ 0.59
TNFSF9-201ENST00000245817 CAPN8A6NHC0 703 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 OGNP20774 298 aaKnown RBP18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 PSMA3P25788 255 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 HNF1BP35680 557 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 CLCN5P51795 746 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 INSCQ1MX18 579 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 BRAT1Q6PJG6 821 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 LYSMD3Q7Z3D4 306 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 CMC1Q7Z7K0 106 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 TERB1Q8NA31 727 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 KDM1BQ8NB78 822 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 NXPE3Q969Y0 559 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 ECHDC3Q96DC8 303 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 LRIG1Q96JA1 1093 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 KLHL32Q96NJ5 620 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 OSBPL1AQ9BXW6 950 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 FAM107BQ9H098 131 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 RABEP2Q9H5N1 569 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 CAB39LQ9H9S4 337 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 CD207Q9UJ71 328 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 XIRP2A4UGR9 3374 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 A0A096LPK6 155 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 PRRT4C9JH25 899 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 NDUFAB1O14561 156 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 STMN1P16949 149 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 CRABP2P29373 138 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 EIF2DP41214 584 aaKnown RBP18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 POU4F1Q01851 419 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 PTPRRQ15256 657 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 ARSIQ5FYB1 569 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 CNSTQ6PJW8 725 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 KYAT3Q6YP21 454 aaKnown RBP18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 CCDC63Q8NA47 563 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 SCG3Q8WXD2 468 aaKnown RBP18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 SCRN2Q96FV2 425 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 NSRP1Q9H0G5 558 aaKnown RBP18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 BRD9Q9H8M2 597 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 IL17CQ9P0M4 197 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 FKBPLQ9UIM3 349 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 VPS9D1Q9Y2B5 631 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 FNDC3AQ9Y2H6 1198 aaKnown RBP18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 SLC30A1Q9Y6M5 507 aa18.73■□□□□ 0.59
TNFSF9-201ENST00000245817 MYLKQ15746 1914 aa18.72■□□□□ 0.59
TNFSF9-201ENST00000245817 LEFTY1O75610 366 aa18.72■□□□□ 0.59
TNFSF9-201ENST00000245817 S1PR4O95977 384 aa18.72■□□□□ 0.59
TNFSF9-201ENST00000245817 GSTA1P08263 222 aa18.72■□□□□ 0.59
TNFSF9-201ENST00000245817 MC4RP32245 332 aa18.72■□□□□ 0.59
TNFSF9-201ENST00000245817 MAGEA12P43365 314 aa18.72■□□□□ 0.59
TNFSF9-201ENST00000245817 ZRANB3Q5FWF4 1079 aa18.72■□□□□ 0.59
TNFSF9-201ENST00000245817 PPM1JQ5JR12 505 aa18.72■□□□□ 0.59
TNFSF9-201ENST00000245817 AARS2Q5JTZ9 985 aaKnown RBP18.72■□□□□ 0.59
TNFSF9-201ENST00000245817 CDHR3Q6ZTQ4 885 aa18.72■□□□□ 0.59
TNFSF9-201ENST00000245817 TPRG1Q6ZUI0 275 aa18.72■□□□□ 0.59
TNFSF9-201ENST00000245817 LDB1Q86U70 411 aaPredicted RBP18.72■□□□□ 0.59
TNFSF9-201ENST00000245817 SLC41A1Q8IVJ1 513 aa18.72■□□□□ 0.59
TNFSF9-201ENST00000245817 LRRC8CQ8TDW0 803 aa18.72■□□□□ 0.59
TNFSF9-201ENST00000245817 CSGALNACT1Q8TDX6 532 aa18.72■□□□□ 0.59
TNFSF9-201ENST00000245817 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.72■□□□□ 0.59
TNFSF9-201ENST00000245817 TSPAN17Q96FV3 270 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms