RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 ASB2Q96Q27 587 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 UHRF1Q96T88 793 aaPredicted RBP18.74■□□□□ 0.59
CPSF3-201ENST00000238112 TMEM79Q9BSE2 394 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 AKTIPQ9H8T0 292 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 SPON1Q9HCB6 807 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 ABI2Q9NYB9 513 aaPredicted RBP18.74■□□□□ 0.59
CPSF3-201ENST00000238112 ZNF839A8K0R7 811 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 NR5A2O00482 541 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 ALDOCP09972 364 aaKnown RBP18.74■□□□□ 0.59
CPSF3-201ENST00000238112 OR4Q2P0C623 313 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 GPX3P22352 226 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 PAX3P23760 479 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 TBX4P57082 545 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 TMEM259Q4ZIN3 620 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 SLC39A12Q504Y0 691 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 CXCL17Q6UXB2 119 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 OR2T34Q8NGX1 318 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 OR2T3Q8NH03 318 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 UROC1Q96N76 676 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 TMEM248Q9NWD8 314 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 PADI3Q9ULW8 664 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 RNF11Q9Y3C5 154 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 KCTD3Q9Y597 815 aa18.74■□□□□ 0.59
CPSF3-201ENST00000238112 A0A0J9YYE9 177 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 KLHL33A6NCF5 533 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 IQCA1LA6NCM1 817 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 MGEA5O60502 916 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 KPNA6O60684 536 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 GRIA3P42263 894 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 BORAQ6PGQ7 559 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 FUNDC1Q8IVP5 155 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 MYO1HQ8N1T3 1032 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 TRIML2Q8N7C3 387 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 PTGR2Q8N8N7 351 aaPredicted RBP18.73■□□□□ 0.59
CPSF3-201ENST00000238112 CCT7Q99832 543 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 PRDM5Q9NQX1 630 aaPredicted RBP18.73■□□□□ 0.59
CPSF3-201ENST00000238112 AKAP10O43572 662 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 TIPRLO75663 272 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 CNTN5O94779 1100 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 GLP2RO95838 553 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 AKR1A1P14550 325 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 CD1DP15813 335 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 TYMPP19971 482 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 FDXRP22570 491 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 ETFBP38117 255 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 NME5P56597 212 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 SH3BP2P78314 561 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 ILF2Q12905 390 aaKnown RBP18.73■□□□□ 0.59
CPSF3-201ENST00000238112 UGT3A2Q3SY77 523 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 ALFQ53S48 1182 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 MS4A13Q5J8X5 152 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 PITRM1Q5JRX3 1037 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 HMBOX1Q6NT76 420 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 ZBTB49Q6ZSB9 765 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 MON1AQ86VX9 555 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 CARM1Q86X55 608 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 SLC39A13Q96H72 371 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 SLC29A1Q99808 456 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 MID1IP1Q9NPA3 183 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 DNAJC15Q9Y5T4 150 aa18.73■□□□□ 0.59
CPSF3-201ENST00000238112 DOCK3Q8IZD9 2030 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 F8W810 466 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 LDB2O43679 373 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 H6PDO95479 791 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 USP46P62068 366 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 MGAT3Q09327 533 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 IHHQ14623 411 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 IRAK1BP1Q5VVH5 260 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 SERINC5Q86VE9 423 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 SH3RF2Q8TEC5 729 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 TBATAQ96M53 351 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 TRIM15Q9C019 465 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 IL1RL2Q9HB29 575 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 PNPLA3Q9NST1 481 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 ATXN10Q9UBB4 475 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 NDUFAF1Q9Y375 327 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 MIA3Q5JRA6 1907 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 A0A0U1RQF3 1178 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 TMCC1O94876 653 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 ATXN1LP0C7T5 689 aaKnown RBP18.72■□□□□ 0.59
CPSF3-201ENST00000238112 HOXB8P17481 243 aaPredicted RBP18.72■□□□□ 0.59
CPSF3-201ENST00000238112 THPOP40225 353 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 SDHAF4Q5VUM1 108 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 MRNIPQ6NTE8 343 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 MSANTD2Q6P1R3 559 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 PRMT9Q6P2P2 845 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 RETREG3Q86VR2 466 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 DDIASQ8IXT1 998 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 ZNF683Q8IZ20 524 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 MIER2Q8N344 545 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 TEX26Q8N6G2 289 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 ANKFN1Q8N957 763 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 BLOC1S5Q8TDH9 187 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 TWIST2Q8WVJ9 160 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 CANT1Q8WVQ1 401 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 HOPXQ9BPY8 73 aaPredicted RBP18.72■□□□□ 0.59
CPSF3-201ENST00000238112 CAAP1Q9H8G2 361 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.72■□□□□ 0.59
CPSF3-201ENST00000238112 SCML2Q9UQR0 700 aa18.72■□□□□ 0.59
CPSF3-201ENST00000238112 MYRFQ9Y2G1 1151 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms