RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 UBAP2LQ14157 1087 aaKnown RBP11.12□□□□□ -0.63
MSH6-201ENST00000234420 LRRC70Q7Z2Q7 622 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 CCDC28AQ8IWP9 274 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 ZNF248Q8NDW4 579 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 FAM84BQ96KN1 310 aaPredicted RBP11.12□□□□□ -0.63
MSH6-201ENST00000234420 EPYCQ99645 322 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 TCF25Q9BQ70 676 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 APODP05090 189 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 OR56A5P0C7T3 313 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 RPL35P42766 123 aaKnown RBP11.12□□□□□ -0.63
MSH6-201ENST00000234420 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.12□□□□□ -0.63
MSH6-201ENST00000234420 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.12□□□□□ -0.63
MSH6-201ENST00000234420 UXTQ9UBK9 157 aaPredicted RBP11.12□□□□□ -0.63
MSH6-201ENST00000234420 CXCL8P10145 99 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 MSX2P35548 267 aaPredicted RBP11.12□□□□□ -0.63
MSH6-201ENST00000234420 CHAF1BQ13112 559 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 DNASE1L3Q13609 305 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 MILR1Q7Z6M3 343 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 MAGEC3Q8TD91 643 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 SOCS4Q8WXH5 440 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 TCHHQ07283 1943 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 A0A075B6Q4 140 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 FGBP02675 491 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 SDC2P34741 201 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 TBX2Q13207 712 aaPredicted RBP11.12□□□□□ -0.63
MSH6-201ENST00000234420 LIN52Q52LA3 116 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 RAB12Q6IQ22 244 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 RASGEF1AQ8N9B8 481 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 ZNF717Q9BY31 904 aaPredicted RBP11.12□□□□□ -0.63
MSH6-201ENST00000234420 ADAM7Q9H2U9 754 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 BUD23O43709 281 aaKnown RBP11.12□□□□□ -0.63
MSH6-201ENST00000234420 MAFKO60675 156 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 NTRK1P04629 796 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 GNA13Q14344 377 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 GPR158Q5T848 1215 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 OR5T3Q8NGG3 340 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 MSANTD3Q96H12 275 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 SLC25A23Q9BV35 468 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 PNO1Q9NRX1 252 aaKnown RBP11.12□□□□□ -0.63
MSH6-201ENST00000234420 FAM105AQ9NUU6 356 aa11.12□□□□□ -0.63
MSH6-201ENST00000234420 KDM6AO15550 1401 aaPredicted RBP11.11□□□□□ -0.63
MSH6-201ENST00000234420 NINQ8N4C6 2090 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 TBX1O43435 398 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 KERAO60938 352 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 FESP07332 822 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 ZNF12P17014 697 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 CRATP43155 626 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 MXD1Q05195 221 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 GRM4Q14833 912 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 PDCD4Q53EL6 469 aaKnown RBP11.11□□□□□ -0.63
MSH6-201ENST00000234420 C2orf27AQ580R0 203 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 CYP4V2Q6ZWL3 525 aaPredicted RBP11.11□□□□□ -0.63
MSH6-201ENST00000234420 RELL1Q8IUW5 271 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 LIX1Q8N485 282 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 APOPT1Q96IL0 206 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 MTF2Q9Y483 593 aaPredicted RBP11.11□□□□□ -0.63
MSH6-201ENST00000234420 GIMD1P0DJR0 217 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 RGS19P49795 217 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 ECH1Q13011 328 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 STYK1Q6J9G0 422 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 CXorf57Q6NSI4 855 aaKnown RBP11.11□□□□□ -0.63
MSH6-201ENST00000234420 DEPDC4Q8N2C3 294 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 CPA6Q8N4T0 437 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 CEP295NLQ96MC4 621 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 MXRA8Q9BRK3 442 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 CD84Q9UIB8 345 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 HCN4Q9Y3Q4 1203 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 MYH14Q7Z406 1995 aaKnown RBP11.11□□□□□ -0.63
MSH6-201ENST00000234420 A0A1W2PQJ5 194 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 SLC16A3O15427 465 aaKnown RBP11.11□□□□□ -0.63
MSH6-201ENST00000234420 ALPPL2P10696 532 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 HSD3B1P14060 373 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 AKR1A1P14550 325 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 HYAL2Q12891 473 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 DUS1LQ6P1R4 473 aaKnown RBP11.11□□□□□ -0.63
MSH6-201ENST00000234420 PTCHD4Q6ZW05 846 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 MPP5Q8N3R9 675 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 OR52L1Q8NGH7 329 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 ACER1Q8TDN7 264 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 SLC38A2Q96QD8 506 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 PRAG1Q86YV5 1406 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 UBA1P22314 1058 aaKnown RBP11.11□□□□□ -0.63
MSH6-201ENST00000234420 TUBG1P23258 451 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 SSTR1P30872 391 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 ENPEPQ07075 957 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 TARBP2Q15633 366 aaKnown RBP11.11□□□□□ -0.63
MSH6-201ENST00000234420 CBWD6Q4V339 395 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 ZYG11AQ6WRX3 759 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 ZNF433Q8N7K0 673 aaPredicted RBP11.11□□□□□ -0.63
MSH6-201ENST00000234420 PIH1D2Q8WWB5 315 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 STRBPQ96SI9 672 aaKnown RBP11.11□□□□□ -0.63
MSH6-201ENST00000234420 MYH3P11055 1940 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 LOC100509620A0A075B734 347 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 OTOL1A6NHN0 477 aaPredicted RBP11.11□□□□□ -0.63
MSH6-201ENST00000234420 ORC5O43913 435 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 PLIN3O60664 434 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 CCNFP41002 786 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 GPR15P49685 360 aa11.11□□□□□ -0.63
MSH6-201ENST00000234420 NR0B1P51843 470 aaKnown RBP11.11□□□□□ -0.63
MSH6-201ENST00000234420 HSPA14Q0VDF9 509 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms