RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 ME2P23368 584 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 ABCG1P45844 678 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 PLD1Q13393 1074 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 LSM12Q3MHD2 195 aaKnown RBP13.13□□□□□ -0.31
PLOD3-201ENST00000223127 Q6ZNX1 250 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 ZNF683Q8IZ20 524 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 DCLK2Q8N568 766 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 FAM156AQ8NDB6 213 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 RP9Q8TA86 221 aaKnown RBP13.13□□□□□ -0.31
PLOD3-201ENST00000223127 PSMG2Q969U7 264 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 MOCOSQ96EN8 888 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 CASS4Q9NQ75 786 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 ACSS2Q9NR19 701 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 GKN1Q9NS71 199 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 ZNHIT2Q9UHR6 403 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.13□□□□□ -0.31
PLOD3-201ENST00000223127 SUPT3HO75486 399 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 SOD2P04179 222 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 IRF1P10914 325 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 RHOQP17081 205 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 HTR7P34969 479 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 ATP5C1P36542 298 aaKnown RBP13.13□□□□□ -0.31
PLOD3-201ENST00000223127 ETFBP38117 255 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 ENTPD1P49961 510 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 NDST2P52849 883 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 IRF9Q00978 393 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 NADSYN1Q6IA69 706 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 PATL1Q86TB9 770 aaKnown RBP13.13□□□□□ -0.31
PLOD3-201ENST00000223127 TRIML2Q8N7C3 387 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 ZNF461Q8TAF7 563 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 ATP6V1E2Q96A05 226 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 MARK4Q96L34 752 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 ZNF597Q96LX8 424 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 RANBP9Q96S59 729 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 FICDQ9BVA6 458 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 C11orf49Q9H6J7 331 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 LRRC40Q9H9A6 602 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 GLOD4Q9HC38 313 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 NT5MQ9NPB1 228 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 BCAP29Q9UHQ4 241 aa13.13□□□□□ -0.31
PLOD3-201ENST00000223127 CNOT11Q9UKZ1 510 aaKnown RBP13.13□□□□□ -0.31
PLOD3-201ENST00000223127 SH3PXD2BA1X283 911 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 TMEM221A6NGB7 291 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 H3BNH8 94 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 PRRG1O14668 218 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 VAPBO95292 243 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 H6PDO95479 791 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 ZDHHC11BP0C7U3 371 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 OR1E1P30953 314 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 PPARGP37231 505 aaPredicted RBP13.12□□□□□ -0.31
PLOD3-201ENST00000223127 GP5P40197 560 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 CCR10P46092 362 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 SLC10A7Q0GE19 358 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 POU6F1Q14863 301 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 IL23RQ5VWK5 629 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 TMEM198Q66K66 360 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 LGI2Q8N0V4 545 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 ISL2Q96A47 359 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 CERS2Q96G23 380 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 YME1L1Q96TA2 773 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 AGAP2Q99490 1192 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 IL12RB2Q99665 862 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 SP110Q9HB58 689 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 TXNDC16Q9P2K2 825 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 BACE2Q9Y5Z0 518 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 MATN2O00339 956 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 EFEMP2O95967 443 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 TCN1P20061 433 aaPredicted RBP13.12□□□□□ -0.31
PLOD3-201ENST00000223127 CHRNA4P43681 627 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 WDR5P61964 334 aaKnown RBP13.12□□□□□ -0.31
PLOD3-201ENST00000223127 NAPEPLDQ6IQ20 393 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 PTAR1Q7Z6K3 402 aaPredicted RBP13.12□□□□□ -0.31
PLOD3-201ENST00000223127 DENND1CQ8IV53 801 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 RNF168Q8IYW5 571 aaPredicted RBP13.12□□□□□ -0.31
PLOD3-201ENST00000223127 SLC39A11Q8N1S5 342 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 EME1Q96AY2 570 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 NAT9Q9BTE0 207 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 GATA5Q9BWX5 397 aaPredicted RBP13.12□□□□□ -0.31
PLOD3-201ENST00000223127 FSD1LQ9BXM9 530 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 COQ10BQ9H8M1 238 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 SMPD4Q9NXE4 827 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 AFF4Q9UHB7 1163 aaKnown RBP13.12□□□□□ -0.31
PLOD3-201ENST00000223127 DNMT3LQ9UJW3 386 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 AAR2Q9Y312 384 aaKnown RBP13.12□□□□□ -0.31
PLOD3-201ENST00000223127 ABHD14A-ACY1A0A1B0GW23 586 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 ZNF840PA6NDX5 716 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 ERI2A8K979 691 aaKnown RBP13.12□□□□□ -0.31
PLOD3-201ENST00000223127 ZBBXA8MT70 800 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 COCHO43405 550 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 ZNF189O75820 626 aaPredicted RBP13.12□□□□□ -0.31
PLOD3-201ENST00000223127 HMGA1P17096 107 aaKnown RBP13.12□□□□□ -0.31
PLOD3-201ENST00000223127 ACVRL1P37023 503 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 NRG1Q02297 640 aaPredicted RBP13.12□□□□□ -0.31
PLOD3-201ENST00000223127 NSUN2Q08J23 767 aaKnown RBP eCLIP13.12□□□□□ -0.31
PLOD3-201ENST00000223127 CDH17Q12864 832 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 C1orf53Q5VUE5 145 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 AFMIDQ63HM1 303 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 TIGD7Q6NT04 549 aaPredicted RBP13.12□□□□□ -0.31
PLOD3-201ENST00000223127 ELMSAN1Q6PJG2 1045 aa13.12□□□□□ -0.31
PLOD3-201ENST00000223127 UMODL1-AS1Q8N2C9 162 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms