RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 CDK20Q8IZL9 346 aa11.09□□□□□ -0.63
USP31-201ENST00000219689 TBC1D30Q9Y2I9 924 aa11.09□□□□□ -0.63
USP31-201ENST00000219689 YARS2Q9Y2Z4 477 aaKnown RBP11.09□□□□□ -0.63
USP31-201ENST00000219689 ARFGEF3Q5TH69 2177 aa11.09□□□□□ -0.63
USP31-201ENST00000219689 PPEF1O14829 653 aaPredicted RBP11.09□□□□□ -0.63
USP31-201ENST00000219689 RAPSNQ13702 412 aa11.09□□□□□ -0.63
USP31-201ENST00000219689 UBE2UQ5VVX9 321 aa11.09□□□□□ -0.63
USP31-201ENST00000219689 BRSK2Q8IWQ3 736 aa11.09□□□□□ -0.63
USP31-201ENST00000219689 TMEM246Q9BRR3 403 aa11.09□□□□□ -0.63
USP31-201ENST00000219689 PDP1Q9P0J1 537 aaPredicted RBP11.09□□□□□ -0.63
USP31-201ENST00000219689 FXYD6-FXYD2A0A087WZ82 144 aa11.09□□□□□ -0.63
USP31-201ENST00000219689 A0A087X0B3 334 aa11.09□□□□□ -0.63
USP31-201ENST00000219689 M0QYT0 321 aa11.09□□□□□ -0.63
USP31-201ENST00000219689 TSPAN1O60635 241 aa11.09□□□□□ -0.63
USP31-201ENST00000219689 APOC1P02654 83 aa11.09□□□□□ -0.63
USP31-201ENST00000219689 GABRB2P47870 512 aa11.09□□□□□ -0.63
USP31-201ENST00000219689 CDKL4Q5MAI5 379 aa11.09□□□□□ -0.63
USP31-201ENST00000219689 SHQ1Q6PI26 577 aaKnown RBP11.09□□□□□ -0.63
USP31-201ENST00000219689 SRFBP1Q8NEF9 429 aaKnown RBP11.09□□□□□ -0.63
USP31-201ENST00000219689 ATL1Q8WXF7 558 aa11.09□□□□□ -0.63
USP31-201ENST00000219689 SERAC1Q96JX3 654 aa11.09□□□□□ -0.63
USP31-201ENST00000219689 SLITRK1Q96PX8 696 aa11.09□□□□□ -0.63
USP31-201ENST00000219689 FXYD6Q9H0Q3 95 aa11.09□□□□□ -0.63
USP31-201ENST00000219689 SEMA4BQ9NPR2 832 aaPredicted RBP11.09□□□□□ -0.63
USP31-201ENST00000219689 CD2P06729 351 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 ITGAVP06756 1048 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 MSR1P21757 451 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 LCN1P31025 176 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 CYP24A1Q07973 514 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 STARD3Q14849 445 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 KYAT1Q16773 422 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 CENPOQ9BU64 300 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 BTG4Q9NY30 223 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 AP3M1Q9Y2T2 418 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 IL18RAPO95256 599 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 HLA-DQA2P01906 255 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 BPGMP07738 259 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 DRG2P55039 364 aaKnown RBP11.08□□□□□ -0.64
USP31-201ENST00000219689 AP3S2P59780 193 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 TPRG1LQ5T0D9 272 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 HECTD3Q5T447 861 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 DNAJB7Q7Z6W7 309 aaPredicted RBP11.08□□□□□ -0.64
USP31-201ENST00000219689 LPGAT1Q92604 370 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 CCDC120Q96HB5 630 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 PDGFCQ9NRA1 345 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 AASSQ9UDR5 926 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 USP20Q9Y2K6 914 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 TRAV6A0A075B6T7 132 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 KCNK1O00180 336 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 SNX4O95219 450 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 TIGD6Q17RP2 521 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 IDNKQ5T6J7 187 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 SSX3Q99909 188 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 GDAP2Q9NXN4 497 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 IGSF9Q9P2J2 1179 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 LIASO43766 372 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 IPO13O94829 963 aaKnown RBP11.08□□□□□ -0.64
USP31-201ENST00000219689 IGKV5-2P06315 115 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 CYP3A4P08684 503 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 CTSKP43235 329 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 SSX2Q16385 188 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 C14orf80Q86SX3 495 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 C10orf82Q8WW14 230 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 ELAC1Q9H777 363 aaKnown RBP11.08□□□□□ -0.64
USP31-201ENST00000219689 NDUFAF4Q9P032 175 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 POMPQ9Y244 141 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 PXDNLA1KZ92 1463 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 NCANO14594 1321 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 ZNF608Q9ULD9 1512 aaPredicted RBP11.08□□□□□ -0.64
USP31-201ENST00000219689 JCHAINP01591 159 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 HMGCRP04035 888 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 DDX53Q86TM3 631 aaKnown RBP11.08□□□□□ -0.64
USP31-201ENST00000219689 GPR65Q8IYL9 337 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 DCSTAMPQ9H295 470 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 ALG2Q9H553 416 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 COMMD3Q9UBI1 195 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 FEM1BQ9UK73 627 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 HDDC3Q8N4P3 179 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 POMGNT2Q8NAT1 580 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 OR52L1Q8NGH7 329 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 STOML3Q8TAV4 291 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 PMEPA1Q969W9 287 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 CENPNQ96H22 339 aaPredicted RBP11.08□□□□□ -0.64
USP31-201ENST00000219689 OMDQ99983 421 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 TBL1YQ9BQ87 522 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 CBWD1Q9BRT8 395 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 C11orf16Q9NQ32 467 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 ZNF705EA8MWA4 302 aaPredicted RBP11.08□□□□□ -0.64
USP31-201ENST00000219689 COX7A2P14406 83 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 SLC15A1P46059 708 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 MARSP56192 900 aaKnown RBP11.08□□□□□ -0.64
USP31-201ENST00000219689 TLCD1Q96CP7 247 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 PPM1MQ96MI6 270 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 RNASEH1O60930 286 aaKnown RBP11.08□□□□□ -0.64
USP31-201ENST00000219689 XRCC1P18887 633 aaPredicted RBP11.08□□□□□ -0.64
USP31-201ENST00000219689 FOXN2P32314 431 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 CLK3P49761 638 aaKnown RBP11.08□□□□□ -0.64
USP31-201ENST00000219689 AFF1P51825 1210 aaKnown RBP11.08□□□□□ -0.64
USP31-201ENST00000219689 KATNAL2Q8IYT4 538 aa11.08□□□□□ -0.64
USP31-201ENST00000219689 NELL1Q92832 810 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms