RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 ACDQ96AP0 544 aa29.71■■■□□ 2.35
PABPN1-201ENST00000216727 GCNAQ96QF7 691 aa29.71■■■□□ 2.35
PABPN1-201ENST00000216727 POMKQ9H5K3 350 aa29.71■■■□□ 2.35
PABPN1-201ENST00000216727 ANKRD36A6QL64 1941 aa29.7■■■□□ 2.35
PABPN1-201ENST00000216727 SPECC1L-ADORA2AF8WAN1 911 aa29.7■■■□□ 2.34
PABPN1-201ENST00000216727 TIAL1Q01085 375 aaKnown RBP eCLIP29.7■■■□□ 2.34
PABPN1-201ENST00000216727 MPPE1Q53F39 396 aa29.7■■■□□ 2.34
PABPN1-201ENST00000216727 SEL1L3Q68CR1 1132 aa29.7■■■□□ 2.34
PABPN1-201ENST00000216727 RETSATQ6NUM9 610 aa29.7■■■□□ 2.34
PABPN1-201ENST00000216727 TRIM67Q6ZTA4 783 aa29.7■■■□□ 2.34
PABPN1-201ENST00000216727 MAPK15Q8TD08 544 aa29.7■■■□□ 2.34
PABPN1-201ENST00000216727 SGF29Q96ES7 293 aa29.7■■■□□ 2.34
PABPN1-201ENST00000216727 CNDP1Q96KN2 507 aa29.7■■■□□ 2.34
PABPN1-201ENST00000216727 AARSD1Q9BTE6 412 aaKnown RBP29.7■■■□□ 2.34
PABPN1-201ENST00000216727 EMILIN2Q9BXX0 1053 aa29.7■■■□□ 2.34
PABPN1-201ENST00000216727 FCF1Q9Y324 198 aaKnown RBP29.7■■■□□ 2.34
PABPN1-201ENST00000216727 B2RBV5 119 aa29.69■■■□□ 2.34
PABPN1-201ENST00000216727 IPO13O94829 963 aaKnown RBP29.69■■■□□ 2.34
PABPN1-201ENST00000216727 AP1S1P61966 158 aa29.69■■■□□ 2.34
PABPN1-201ENST00000216727 SLC9B1Q4ZJI4 515 aa29.69■■■□□ 2.34
PABPN1-201ENST00000216727 WASHC2DQ5SRD0 308 aa29.69■■■□□ 2.34
PABPN1-201ENST00000216727 GPR158Q5T848 1215 aa29.69■■■□□ 2.34
PABPN1-201ENST00000216727 BBS7Q8IWZ6 715 aa29.69■■■□□ 2.34
PABPN1-201ENST00000216727 ZBED2Q9BTP6 218 aa29.69■■■□□ 2.34
PABPN1-201ENST00000216727 A0A1W2PRU2 124 aa29.69■■■□□ 2.34
PABPN1-201ENST00000216727 CCR10P46092 362 aa29.69■■■□□ 2.34
PABPN1-201ENST00000216727 PPIGQ13427 754 aaKnown RBP eCLIP29.69■■■□□ 2.342e-13■■■□□ 17.4
PABPN1-201ENST00000216727 PIM3Q86V86 326 aa29.69■■■□□ 2.34
PABPN1-201ENST00000216727 SLC22A9Q8IVM8 553 aa29.69■■■□□ 2.34
PABPN1-201ENST00000216727 USP13Q92995 863 aaPredicted RBP29.69■■■□□ 2.34
PABPN1-201ENST00000216727 C1orf21Q9H246 121 aa29.69■■■□□ 2.34
PABPN1-201ENST00000216727 ASAH2Q9NR71 780 aa29.69■■■□□ 2.34
PABPN1-201ENST00000216727 ZDHHC2Q9UIJ5 367 aa29.69■■■□□ 2.34
PABPN1-201ENST00000216727 CCND1P24385 295 aa29.68■■■□□ 2.34
PABPN1-201ENST00000216727 MNAT1P51948 309 aa29.68■■■□□ 2.34
PABPN1-201ENST00000216727 ISCA2Q86U28 154 aa29.68■■■□□ 2.34
PABPN1-201ENST00000216727 APCDD1Q8J025 514 aa29.68■■■□□ 2.34
PABPN1-201ENST00000216727 CCNYL1Q8N7R7 359 aa29.68■■■□□ 2.34
PABPN1-201ENST00000216727 LPGAT1Q92604 370 aa29.68■■■□□ 2.34
PABPN1-201ENST00000216727 MCUR1Q96AQ8 359 aa29.68■■■□□ 2.34
PABPN1-201ENST00000216727 TCF25Q9BQ70 676 aa29.68■■■□□ 2.34
PABPN1-201ENST00000216727 CD248Q9HCU0 757 aa29.68■■■□□ 2.34
PABPN1-201ENST00000216727 ACSS2Q9NR19 701 aa29.68■■■□□ 2.34
PABPN1-201ENST00000216727 LZTS1Q9Y250 596 aa29.68■■■□□ 2.34
PABPN1-201ENST00000216727 A8MT66 165 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 GLUD1P00367 558 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 MT-CO1P00395 513 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 PENKP01210 267 aaPredicted RBP29.67■■■□□ 2.34
PABPN1-201ENST00000216727 KDSRQ06136 332 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 TTC30BQ8N4P2 665 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 AGR3Q8TD06 166 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 AGAP11Q8TF27 550 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 BHMTQ93088 406 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 SMIM14Q96QK8 99 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 TCF7L2Q9NQB0 619 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 VPS9D1Q9Y2B5 631 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 H7C0S8 307 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 GRID2O43424 1007 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 ABL2P42684 1182 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 CPA2P48052 419 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 ARHGAP24Q8N264 748 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 FIBINQ8TAL6 211 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 SH3RF2Q8TEC5 729 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 SLC46A2Q9BY10 475 aa29.67■■■□□ 2.34
PABPN1-201ENST00000216727 KIAA1522Q9P206 1035 aaPredicted RBP29.67■■■□□ 2.34
PABPN1-201ENST00000216727 NEMP2A6NFY4 417 aa29.66■■■□□ 2.34
PABPN1-201ENST00000216727 LEFTY2O00292 366 aa29.66■■■□□ 2.34
PABPN1-201ENST00000216727 NRG2O14511 850 aaPredicted RBP29.66■■■□□ 2.34
PABPN1-201ENST00000216727 SLC4A1P02730 911 aa29.66■■■□□ 2.34
PABPN1-201ENST00000216727 ZNF37AP17032 561 aaPredicted RBP29.66■■■□□ 2.34
PABPN1-201ENST00000216727 METTL3Q86U44 580 aaKnown RBP29.66■■■□□ 2.34
PABPN1-201ENST00000216727 RBM15BQ8NDT2 890 aaKnown RBP29.66■■■□□ 2.34
PABPN1-201ENST00000216727 TTC16Q8NEE8 873 aa29.66■■■□□ 2.34
PABPN1-201ENST00000216727 SP7Q8TDD2 431 aaPredicted RBP29.66■■■□□ 2.34
PABPN1-201ENST00000216727 CORO1BQ9BR76 489 aa29.66■■■□□ 2.34
PABPN1-201ENST00000216727 ARHGAP26Q9UNA1 814 aa29.66■■■□□ 2.34
PABPN1-201ENST00000216727 PRSS56P0CW18 603 aa29.66■■■□□ 2.34
PABPN1-201ENST00000216727 CD1DP15813 335 aa29.66■■■□□ 2.34
PABPN1-201ENST00000216727 KCNA5P22460 613 aa29.66■■■□□ 2.34
PABPN1-201ENST00000216727 ERVFC1P60507 584 aa29.66■■■□□ 2.34
PABPN1-201ENST00000216727 ATXN7L2Q5T6C5 722 aaPredicted RBP29.66■■■□□ 2.34
PABPN1-201ENST00000216727 KDM1BQ8NB78 822 aa29.66■■■□□ 2.34
PABPN1-201ENST00000216727 POLR3BQ9NW08 1133 aaPredicted RBP29.66■■■□□ 2.34
PABPN1-201ENST00000216727 PCDHB9Q9Y5E1 797 aa29.66■■■□□ 2.34
PABPN1-201ENST00000216727 CXorf51AA0A1B0GTR3 108 aa29.65■■■□□ 2.34
PABPN1-201ENST00000216727 F8W8V4 182 aa29.65■■■□□ 2.34
PABPN1-201ENST00000216727 STX7O15400 261 aaKnown RBP29.65■■■□□ 2.34
PABPN1-201ENST00000216727 GJA1P17302 382 aa29.65■■■□□ 2.34
PABPN1-201ENST00000216727 CSNK1DP48730 415 aa29.65■■■□□ 2.34
PABPN1-201ENST00000216727 GALNT1Q10472 559 aaPredicted RBP29.65■■■□□ 2.34
PABPN1-201ENST00000216727 DNAL1Q4LDG9 190 aa29.65■■■□□ 2.34
PABPN1-201ENST00000216727 EFHBQ8N7U6 833 aa29.65■■■□□ 2.34
PABPN1-201ENST00000216727 DENND2DQ9H6A0 471 aaPredicted RBP29.65■■■□□ 2.34
PABPN1-201ENST00000216727 ALG9Q9H6U8 611 aa29.65■■■□□ 2.34
PABPN1-201ENST00000216727 MAN1C1Q9NR34 630 aa29.65■■■□□ 2.34
PABPN1-201ENST00000216727 CXXC1Q9P0U4 656 aaPredicted RBP29.65■■■□□ 2.34
PABPN1-201ENST00000216727 MAGEC1O60732 1142 aa29.64■■■□□ 2.34
PABPN1-201ENST00000216727 NDUFS3O75489 264 aa29.64■■■□□ 2.34
PABPN1-201ENST00000216727 NCF2P19878 526 aaPredicted RBP29.64■■■□□ 2.34
PABPN1-201ENST00000216727 NFKB2Q00653 900 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms