RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 CLIC3O95833 236 aa11.56□□□□□ -0.56
DNMT3B-201ENST00000201963 THP07101 528 aa11.56□□□□□ -0.56
DNMT3B-201ENST00000201963 LINC00032P0C843 101 aa11.56□□□□□ -0.56
DNMT3B-201ENST00000201963 CSF2RAP15509 400 aa11.56□□□□□ -0.56
DNMT3B-201ENST00000201963 IL12RB1P42701 662 aa11.56□□□□□ -0.56
DNMT3B-201ENST00000201963 GDF6Q6KF10 455 aaPredicted RBP11.56□□□□□ -0.56
DNMT3B-201ENST00000201963 TMEM214Q6NUQ4 689 aaKnown RBP11.56□□□□□ -0.56
DNMT3B-201ENST00000201963 ABHD15Q6UXT9 468 aa11.56□□□□□ -0.56
DNMT3B-201ENST00000201963 ADHFE1Q8IWW8 467 aa11.56□□□□□ -0.56
DNMT3B-201ENST00000201963 HM13Q8TCT9 377 aa11.56□□□□□ -0.56
DNMT3B-201ENST00000201963 PROX1Q92786 737 aa11.56□□□□□ -0.56
DNMT3B-201ENST00000201963 PGLYRP2Q96PD5 576 aa11.56□□□□□ -0.56
DNMT3B-201ENST00000201963 SLC39A3Q9BRY0 314 aa11.56□□□□□ -0.56
DNMT3B-201ENST00000201963 PRKD2Q9BZL6 878 aa11.56□□□□□ -0.56
DNMT3B-201ENST00000201963 TLE6Q9H808 572 aa11.56□□□□□ -0.56
DNMT3B-201ENST00000201963 ABI2Q9NYB9 513 aaPredicted RBP11.56□□□□□ -0.56
DNMT3B-201ENST00000201963 GMEB1Q9Y692 573 aa11.56□□□□□ -0.56
DNMT3B-201ENST00000201963 HNRNPCL2B2RXH8 293 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 TNFRSF21O75509 655 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 KCNH1O95259 989 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 PBX3P40426 434 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 IDH2P48735 452 aaKnown RBP11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 TFAP2DQ7Z6R9 452 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 ADGRG6Q86SQ4 1221 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 ELMOD1Q8N336 334 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 FSTL5Q8N475 847 aaPredicted RBP11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 PXYLP1Q8TE99 480 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 CENPNQ96H22 339 aaPredicted RBP11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 CDT1Q9H211 546 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 LEF1Q9UJU2 399 aaPredicted RBP11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 E7ENX8 843 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 CCNKO75909 580 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 URODP06132 367 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 HIST1H2AGP0C0S8 130 aaPredicted RBP11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 MSH3P20585 1137 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 HIST1H2ADP20671 130 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 PCSK1P29120 753 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 PPP1R26Q5T8A7 1209 aaPredicted RBP11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 REP15Q6BDI9 236 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 MILR1Q7Z6M3 343 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 CLYBLQ8N0X4 340 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 FNDC8Q8TC99 324 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 HIST1H2AHQ96KK5 128 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 HIST1H2AJQ99878 128 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 TSEN34Q9BSV6 310 aaKnown RBP11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 H2AFJQ9BTM1 129 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 CCDC106Q9BWC9 280 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 INVSQ9Y283 1065 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 ADAMTS7Q9UKP4 1686 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 TFECO14948 347 aaPredicted RBP11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 VNN1O95497 513 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 MERTKQ12866 999 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 RRM2BQ7LG56 351 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 SPATA2LQ8IUW3 424 aaPredicted RBP11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 CMASQ8NFW8 434 aaPredicted RBP11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 WNT8BQ93098 351 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 VAT1Q99536 393 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 ACO2Q99798 780 aaKnown RBP11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 HGH1Q9BTY7 390 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 NEMP2A6NFY4 417 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 PMM2O15305 246 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 MFSD11O43934 449 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 RFPL1O75677 317 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 SORBS2O94875 1100 aaKnown RBP11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 CYP4B1P13584 511 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 ADSLP30566 484 aaPredicted RBP11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 SLC7A1P30825 629 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 PNPLA4P41247 253 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 FPGSQ05932 587 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 ZNF460Q14592 562 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 TCEAL1Q15170 157 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 CEP78Q5JTW2 689 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 RALGPS2Q86X27 583 aaPredicted RBP11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 FIBCD1Q8N539 461 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 NAT16Q8N8M0 369 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 PHF21AQ96BD5 680 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 MCRS1Q96EZ8 462 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 PPM1MQ96MI6 270 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 RPRD1AQ96P16 312 aaPredicted RBP11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 PNPLA8Q9NP80 782 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 OAZ3Q9UMX2 235 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 GMPPBQ9Y5P6 360 aa11.55□□□□□ -0.56
DNMT3B-201ENST00000201963 SF3B1O75533 1304 aaKnown RBP eCLIP11.54□□□□□ -0.563e-6■■■□□ 15.6
DNMT3B-201ENST00000201963 FAM155AB1AL88 458 aaPredicted RBP11.54□□□□□ -0.56
DNMT3B-201ENST00000201963 BTN3A1O00481 513 aa11.54□□□□□ -0.56
DNMT3B-201ENST00000201963 RECQL4O94761 1208 aa11.54□□□□□ -0.56
DNMT3B-201ENST00000201963 NCK1P16333 377 aa11.54□□□□□ -0.56
DNMT3B-201ENST00000201963 ZNF182P17025 639 aaPredicted RBP11.54□□□□□ -0.56
DNMT3B-201ENST00000201963 IRF9Q00978 393 aa11.54□□□□□ -0.56
DNMT3B-201ENST00000201963 PRKG2Q13237 762 aa11.54□□□□□ -0.56
DNMT3B-201ENST00000201963 TOP3AQ13472 1001 aaPredicted RBP11.54□□□□□ -0.56
DNMT3B-201ENST00000201963 CA9Q16790 459 aa11.54□□□□□ -0.56
DNMT3B-201ENST00000201963 ZNF829Q3KNS6 432 aaPredicted RBP11.54□□□□□ -0.56
DNMT3B-201ENST00000201963 FAM171A1Q5VUB5 890 aa11.54□□□□□ -0.56
DNMT3B-201ENST00000201963 PAOXQ6QHF9 649 aa11.54□□□□□ -0.56
DNMT3B-201ENST00000201963 PLPPR4Q7Z2D5 763 aa11.54□□□□□ -0.56
DNMT3B-201ENST00000201963 THAP5Q7Z6K1 395 aa11.54□□□□□ -0.56
DNMT3B-201ENST00000201963 PIGZQ86VD9 579 aa11.54□□□□□ -0.56
DNMT3B-201ENST00000201963 MIB1Q86YT6 1006 aa11.54□□□□□ -0.56
DNMT3B-201ENST00000201963 CENPSQ8N2Z9 138 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms